RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ARAP1Q96P48 1450 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 RAD54L2Q9Y4B4 1467 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 A0A1W2PQ45 241 aaPredicted RBP4.13□□□□□ -1.75
CALD1-221ENST00000489019 A0A1W2PQY0 241 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 WTIPA6NIX2 430 aaPredicted RBP4.13□□□□□ -1.75
CALD1-221ENST00000489019 TSPAN15O95858 294 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 SSBP05455 408 aaKnown RBP eCLIP4.13□□□□□ -1.75
CALD1-221ENST00000489019 C1QTNF9P0C862 333 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 PRKCAP17252 672 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 ENDOUP21128 410 aaKnown RBP4.13□□□□□ -1.75
CALD1-221ENST00000489019 PDE6BP35913 854 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 POU4F1Q01851 419 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 VPS37DQ86XT2 251 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 ARHGEF39Q8N4T4 335 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 BHLHE22Q8NFJ8 381 aaPredicted RBP4.13□□□□□ -1.75
CALD1-221ENST00000489019 MICAL1Q8TDZ2 1067 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.13□□□□□ -1.75
CALD1-221ENST00000489019 LGR4Q9BXB1 951 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 GBP3Q9H0R5 595 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 ZNF552Q9H707 407 aaPredicted RBP4.13□□□□□ -1.75
CALD1-221ENST00000489019 ZNF408Q9H9D4 720 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 CRTAC1Q9NQ79 661 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 IMPACTQ9P2X3 320 aa4.13□□□□□ -1.75
CALD1-221ENST00000489019 DIS3Q9Y2L1 958 aaKnown RBP4.13□□□□□ -1.75
CALD1-221ENST00000489019 ANKRD34BA5PLL1 514 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 DBX1A6NMT0 343 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 B2RBV5 119 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 STXBP3O00186 592 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 ETV2O00321 342 aaPredicted RBP4.12□□□□□ -1.75
CALD1-221ENST00000489019 AURKAO14965 403 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 PPM1BO75688 479 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 MSL3P1P0C860 447 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 PNLIPP16233 465 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 DNAJA1P31689 397 aaKnown RBP4.12□□□□□ -1.75
CALD1-221ENST00000489019 NOP2P46087 812 aaKnown RBP4.12□□□□□ -1.75
CALD1-221ENST00000489019 GNL2Q13823 731 aaKnown RBP4.12□□□□□ -1.75
CALD1-221ENST00000489019 PKN1Q16512 942 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 DPY19L1Q2PZI1 675 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 GALNT18Q6P9A2 607 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 C6orf15Q6UXA7 325 aaPredicted RBP4.12□□□□□ -1.75
CALD1-221ENST00000489019 NAT16Q8N8M0 369 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 NUP43Q8NFH3 380 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 RCC1LQ96I51 464 aaKnown RBP4.12□□□□□ -1.75
CALD1-221ENST00000489019 PTCHD1Q96NR3 888 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 ACTR10Q9NZ32 417 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 ACSL6Q9UKU0 697 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 SUGT1Q9Y2Z0 365 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 TAF6LQ9Y6J9 622 aa4.12□□□□□ -1.75
CALD1-221ENST00000489019 POLA1P09884 1462 aaPredicted RBP4.11□□□□□ -1.75
CALD1-221ENST00000489019 ABCA10Q8WWZ4 1543 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 OR14I1A6ND48 311 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 E9PSI1 815 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 PEX10O60683 326 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 MED14OSP0DP75 135 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 GLDCP23378 1020 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 RAP1GAPP47736 663 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 ERVFRD-1P60508 538 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 CYP4F8P98187 520 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 MVKQ03426 396 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 ARID5AQ03989 594 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 HLA-DQA1Q5Y7H0 255 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 LARP1BQ659C4 914 aaKnown RBP4.11□□□□□ -1.75
CALD1-221ENST00000489019 MRM1Q6IN84 353 aaKnown RBP4.11□□□□□ -1.75
CALD1-221ENST00000489019 RCSD1Q6JBY9 416 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 CYP2R1Q6VVX0 501 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 ATG14Q6ZNE5 492 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 KCNN1Q92952 543 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 SLC26A8Q96RN1 970 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 PPP1R16BQ96T49 567 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 GMLQ99445 158 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 SGPP1Q9BX95 441 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 GCM1Q9NP62 436 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 TNFRSF12AQ9NP84 129 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 CD320Q9NPF0 282 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 PRKAG3Q9UGI9 489 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 ARHGAP35Q9NRY4 1499 aa4.11□□□□□ -1.75
CALD1-221ENST00000489019 URB2Q14146 1524 aaKnown RBP4.11□□□□□ -1.75
CALD1-221ENST00000489019 CUL7Q14999 1698 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 C2orf71A6NGG8 1288 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 NFIBO00712 420 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 KCNH1O95259 989 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 TMEM253P0C7T8 217 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 CFPP27918 469 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 VIPR1P32241 457 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 CYP4F3Q08477 520 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 GRB10Q13322 594 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 FZD5Q13467 585 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 NCAPHQ15003 741 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 TNNI3KQ59H18 835 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 EEF1DP3Q658K8 133 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 C1QL4Q86Z23 238 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 FAM178BQ8IXR5 827 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 SLC43A3Q8NBI5 491 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 BVESQ8NE79 360 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 APBA2Q99767 749 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 KLHL14Q9P2G3 628 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 MBD1Q9UIS9 605 aaPredicted RBP4.1□□□□□ -1.75
CALD1-221ENST00000489019 AKT3Q9Y243 479 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms