RNA–Protein interactions for RNA: ENST00000488944.5

WDR46-238, Transcript of WD repeat domain 46, human

TSL 3

Gene WDR46, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-238	ENST00000488944	TNFAIP2	Q03169	654 aa		15.25	■□□□□ 0.03
WDR46-238	ENST00000488944	TKFC	Q3LXA3	575 aa		15.25	■□□□□ 0.03
WDR46-238	ENST00000488944	NSMF	Q6X4W1	530 aa		15.25	■□□□□ 0.03
WDR46-238	ENST00000488944	EEPD1	Q7L9B9	569 aa		15.25	■□□□□ 0.03
WDR46-238	ENST00000488944	PDGFC	Q9NRA1	345 aa		15.25	■□□□□ 0.03
WDR46-238	ENST00000488944	HELLS	Q9NRZ9	838 aa		15.25	■□□□□ 0.03
WDR46-238	ENST00000488944	CCPG1	Q9ULG6	757 aa		15.25	■□□□□ 0.03
WDR46-238	ENST00000488944	FRMPD2	Q68DX3	1309 aa	Predicted RBP	15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	MYO9B	Q13459	2157 aa		15.24	■□□□□ 0.03
WDR46-238	ENST00000488944		A0A0U1RQG5	324 aa	Predicted RBP	15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	ARVCF	O00192	962 aa		15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	TIMP1	P01033	207 aa		15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	FGA	P02671	866 aa		15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	HAND2	P61296	217 aa		15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	NMI	Q13287	307 aa	Predicted RBP	15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	ALX1	Q15699	326 aa		15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	TMEM63B	Q5T3F8	832 aa		15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	ZNF589	Q86UQ0	364 aa	Predicted RBP	15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	FBXO16	Q8IX29	292 aa	Predicted RBP	15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	PPP1R12C	Q9BZL4	782 aa		15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	CYP39A1	Q9NYL5	469 aa		15.24	■□□□□ 0.03
WDR46-238	ENST00000488944	MROH7	Q68CQ1	1323 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	ASB14	A6NK59	587 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	FGR	P09769	529 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	NOV	P48745	357 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	HDAC1	Q13547	482 aa	Predicted RBP	15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	MCMDC2	Q4G0Z9	681 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	MFSD5	Q6N075	450 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	CXCL17	Q6UXB2	119 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	TLK2	Q86UE8	772 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	FAM126B	Q8IXS8	530 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	DCAF4	Q8WV16	495 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	TMEM47	Q9BQJ4	181 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	LNPK	Q9C0E8	428 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	GPCPD1	Q9NPB8	672 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	GNE	Q9Y223	722 aa	Known RBP	15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	PRUNE2	Q8WUY3	3088 aa		15.23	■□□□□ 0.03
WDR46-238	ENST00000488944	CDH23	Q9H251	3354 aa		15.22	■□□□□ 0.03
WDR46-238	ENST00000488944	TRIM6-TRIM34	B2RNG4	842 aa		15.22	■□□□□ 0.03
WDR46-238	ENST00000488944	DYNC1LI2	O43237	492 aa	Predicted RBP	15.22	■□□□□ 0.03
WDR46-238	ENST00000488944	ICAM1	P05362	532 aa		15.22	■□□□□ 0.03
WDR46-238	ENST00000488944	SMPD1	P17405	629 aa		15.22	■□□□□ 0.03
WDR46-238	ENST00000488944	SYDE2	Q5VT97	1194 aa		15.22	■□□□□ 0.03
WDR46-238	ENST00000488944	C16orf59	Q7L2K0	433 aa		15.22	■□□□□ 0.03
WDR46-238	ENST00000488944	MAFA	Q8NHW3	353 aa	Predicted RBP	15.22	■□□□□ 0.03
WDR46-238	ENST00000488944	RANBP17	Q9H2T7	1088 aa	Known RBP	15.22	■□□□□ 0.03
WDR46-238	ENST00000488944	NFIB	O00712	420 aa		15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	TLR3	O15455	904 aa	Known RBP	15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	ACR	P10323	421 aa		15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	HSPD1	P10809	573 aa	Known RBP	15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	TOP1	P11387	765 aa	Known RBP	15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	FOSL2	P15408	326 aa		15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	CSF2RA	P15509	400 aa		15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	DNAJB2	P25686	324 aa		15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	NKX3-2	P78367	333 aa		15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	BAAT	Q14032	418 aa	Predicted RBP	15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	FSCN1	Q16658	493 aa	Known RBP	15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	TAPT1	Q6NXT6	567 aa		15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	RILPL2	Q969X0	211 aa		15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	COL25A1	Q9BXS0	654 aa	Predicted RBP	15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	AP5M1	Q9H0R1	490 aa		15.21	■□□□□ 0.03
WDR46-238	ENST00000488944	CCDC171	Q6TFL3	1326 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	GRXCR1	A8MXD5	290 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	CD4	P01730	458 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	CYP2C18	P33260	490 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	PPIG	Q13427	754 aa	Known RBP eCLIP	15.2	■□□□□ 0.02	1e-6	■■■□□ 17.2
WDR46-238	ENST00000488944	TMEM240	Q5SV17	173 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	B4GALNT3	Q6L9W6	998 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	BTNL9	Q6UXG8	535 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	TBC1D10C	Q8IV04	446 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	GBF1	Q92538	1859 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	LAMA4	Q16363	1823 aa		15.2	■□□□□ 0.02
WDR46-238	ENST00000488944	GRIN2D	O15399	1336 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	UMODL1	Q5DID0	1318 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	PTPDC1	A2A3K4	754 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	PDHB	P11177	359 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	ALDH5A1	P51649	535 aa	Predicted RBP	15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	PSMC6	P62333	389 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	ITGA7	Q13683	1181 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	GRIN2C	Q14957	1233 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	IQSEC1	Q6DN90	963 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	SLC30A10	Q6XR72	485 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	KIAA1211	Q6ZU35	1233 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	ZNF365	Q70YC5	407 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	TMEM199	Q8N511	208 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	SLC43A3	Q8NBI5	491 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	VTA1	Q9NP79	307 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	TCP11L1	Q9NUJ3	509 aa		15.19	■□□□□ 0.02
WDR46-238	ENST00000488944	ZMYM6	O95789	1325 aa		15.18	■□□□□ 0.02
WDR46-238	ENST00000488944	TMEM265	A0A087WTH1	108 aa		15.18	■□□□□ 0.02
WDR46-238	ENST00000488944	CALML3	P27482	149 aa		15.18	■□□□□ 0.02
WDR46-238	ENST00000488944	PBX2	P40425	430 aa		15.18	■□□□□ 0.02
WDR46-238	ENST00000488944	AKNAD1	Q5T1N1	836 aa		15.18	■□□□□ 0.02
WDR46-238	ENST00000488944	MFSD6	Q6ZSS7	791 aa		15.18	■□□□□ 0.02
WDR46-238	ENST00000488944	MORC4	Q8TE76	937 aa		15.18	■□□□□ 0.02
WDR46-238	ENST00000488944	CLEC4D	Q8WXI8	215 aa		15.18	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms