RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TBC1D8O95759 1140 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 TRAF1Q13077 416 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 NCAPG2Q86XI2 1143 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 CCAR1Q8IX12 1150 aaKnown RBP14.19□□□□□ -0.14
TRAIP-209ENST00000488860 ZNF713Q8N859 430 aaPredicted RBP14.19□□□□□ -0.14
TRAIP-209ENST00000488860 GPRC5AQ8NFJ5 357 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 CCDC148Q8NFR7 591 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 IPO9Q96P70 1041 aaKnown RBP14.19□□□□□ -0.14
TRAIP-209ENST00000488860 GJB4Q9NTQ9 266 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 RNF146Q9NTX7 359 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 RNF186Q9NXI6 227 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 H3BQV1 296 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 NLRP5P59047 1200 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 CCNA1P78396 465 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 FAM110CQ1W6H9 321 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 MUM1L1Q5H9M0 696 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 IFFO2Q5TF58 517 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 TYW1BQ6NUM6 668 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 PPP1R18Q6NYC8 613 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 RIOX2Q8IUF8 465 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 CCDC12Q8WUD4 166 aaPredicted RBP14.18□□□□□ -0.14
TRAIP-209ENST00000488860 TRERF1Q96PN7 1200 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 MOV10L1Q9BXT6 1211 aaKnown RBP14.18□□□□□ -0.14
TRAIP-209ENST00000488860 MORF4L1Q9UBU8 362 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 PNMA2Q9UL42 364 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 KCNJ14Q9UNX9 436 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 MRPL11Q9Y3B7 192 aaKnown RBP14.18□□□□□ -0.14
TRAIP-209ENST00000488860 RIPK3Q9Y572 518 aa14.18□□□□□ -0.14
TRAIP-209ENST00000488860 MYH7BA7E2Y1 1941 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 DOCK3Q8IZD9 2030 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 VPS37CA5D8V6 355 aaPredicted RBP14.17□□□□□ -0.14
TRAIP-209ENST00000488860 ATP2A1O14983 1001 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 ERCC3P19447 782 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 ADCY7P51828 1080 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 Q3C1V9 767 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 TKFCQ3LXA3 575 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 LARP1BQ659C4 914 aaKnown RBP14.17□□□□□ -0.14
TRAIP-209ENST00000488860 SHISA4Q96DD7 197 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 BEGAINQ9BUH8 593 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 PORCNQ9H237 461 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 R3HDMLQ9H3Y0 253 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 ACAD9Q9H845 621 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 ZNF236Q9UL36 1845 aa14.17□□□□□ -0.14
TRAIP-209ENST00000488860 SMCO2A6NFE2 343 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 NFIBO00712 420 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 SLC25A27O95847 323 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 BCRP11274 1271 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 PDCP20941 246 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 COPB2P35606 906 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 MAP2K1Q02750 393 aaPredicted RBP14.16□□□□□ -0.14
TRAIP-209ENST00000488860 UBE2SQ16763 222 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 KRT40Q6A162 431 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 C17orf99Q6UX52 265 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 NSMFQ6X4W1 530 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 CUL5Q93034 780 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 EFCC1Q9HA90 598 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 C6orf50Q9HD87 102 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 SH3GLB2Q9NR46 395 aa14.16□□□□□ -0.14
TRAIP-209ENST00000488860 MCM3APO60318 1980 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 CFBP00751 764 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 GNL2Q13823 731 aaKnown RBP14.15□□□□□ -0.14
TRAIP-209ENST00000488860 CHST13Q8NET6 341 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 CLEC4DQ8WXI8 215 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 PHF20Q9BVI0 1012 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 BRMS1Q9HCU9 246 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 SAGE1Q9NXZ1 904 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 FBXO40Q9UH90 709 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 TSKSQ9UJT2 592 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 LRRC37A2A6NM11 1700 aa14.15□□□□□ -0.14
TRAIP-209ENST00000488860 ESYT2A0FGR8 921 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 OPLAHO14841 1288 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 MMP1P03956 469 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 SYT1P21579 422 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 CALML3P27482 149 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 HOXA13P31271 388 aaPredicted RBP14.14□□□□□ -0.15
TRAIP-209ENST00000488860 KRT2P35908 639 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 SAFBQ15424 915 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRAIP-209ENST00000488860 MCTP1Q6DN14 999 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 SLC30A10Q6XR72 485 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 MCF2L2Q86YR7 1114 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 ANKRD35Q8N283 1001 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 DNAJC5GQ8N7S2 189 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 SHCBP1Q8NEM2 672 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 MMP19Q99542 508 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 MROH8Q9H579 483 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 PSTPIP2Q9H939 334 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 RIC8AQ9NPQ8 531 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
TRAIP-209ENST00000488860 GCOM1H8Y6P7 765 aaPredicted RBP14.13□□□□□ -0.15
TRAIP-209ENST00000488860 ADAMTS3O15072 1205 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 STX6O43752 255 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 POLR2MP0CAP2 368 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 GNA11P29992 359 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 MAPK4P31152 587 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 MRPL12P52815 198 aaKnown RBP14.13□□□□□ -0.15
TRAIP-209ENST00000488860 FOXD4L5Q5VV16 416 aaPredicted RBP14.13□□□□□ -0.15
TRAIP-209ENST00000488860 RNF207Q6ZRF8 634 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 GPR142Q7Z601 462 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 FCHSD1Q86WN1 690 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 DIS3L2Q8IYB7 885 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms