RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 ZNF576Q9H609 170 aa13.55□□□□□ -0.24
SNU13-208ENST00000488571 FEM1BQ9UK73 627 aa13.55□□□□□ -0.24
SNU13-208ENST00000488571 SYNPO2Q9UMS6 1093 aa13.55□□□□□ -0.24
SNU13-208ENST00000488571 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
SNU13-208ENST00000488571 TTC28Q96AY4 2481 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.54□□□□□ -0.24
SNU13-208ENST00000488571 GRXCR1A8MXD5 290 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 TTLL1O95922 423 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 PBX2P40425 430 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 OAZ1P54368 228 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 CNTN2Q02246 1040 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNU13-208ENST00000488571 GNASQ5JWF2 1037 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 TIFAQ96CG3 184 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 PBX4Q9BYU1 374 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 FBXO40Q9UH90 709 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 CHD9Q3L8U1 2897 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 ASTN1O14525 1302 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 ZNF536O15090 1300 aa13.54□□□□□ -0.24
SNU13-208ENST00000488571 GBF1Q92538 1859 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 LCTP09848 1927 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 CD4P01730 458 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 TDO2P48775 406 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 BEX3Q00994 111 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 ZNF444Q8N0Y2 327 aaPredicted RBP13.53□□□□□ -0.24
SNU13-208ENST00000488571 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 SPC25Q9HBM1 224 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 PRDM6Q9NQX0 595 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 HOMER2Q9NSB8 354 aa13.53□□□□□ -0.24
SNU13-208ENST00000488571 CTDP1Q9Y5B0 961 aaPredicted RBP13.53□□□□□ -0.24
SNU13-208ENST00000488571 SOWAHBA6NEL2 793 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 ZFYP08048 801 aaPredicted RBP13.52□□□□□ -0.25
SNU13-208ENST00000488571 ACRP10323 421 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 BMP3P12645 472 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 GNAT2P19087 354 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 PTGS1P23219 599 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 SLFN13Q68D06 897 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 ZNF365Q70YC5 407 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 IFNL3Q8IZI9 196 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 TMEM199Q8N511 208 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 SLC43A3Q8NBI5 491 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 NEDD1Q8NHV4 660 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 SYMPKQ92797 1274 aaKnown RBP13.52□□□□□ -0.25
SNU13-208ENST00000488571 VTI1AQ96AJ9 217 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 AGBL1Q96MI9 1066 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 SEC62Q99442 399 aaKnown RBP13.52□□□□□ -0.25
SNU13-208ENST00000488571 DCTPP1Q9H773 170 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 ACAD9Q9H845 621 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 ZNF287Q9HBT7 754 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 A1CFQ9NQ94 594 aaKnown RBP13.52□□□□□ -0.25
SNU13-208ENST00000488571 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 GNEQ9Y223 722 aaKnown RBP13.52□□□□□ -0.25
SNU13-208ENST00000488571 STK24Q9Y6E0 443 aa13.52□□□□□ -0.25
SNU13-208ENST00000488571 DDX49Q9Y6V7 483 aaKnown RBP13.52□□□□□ -0.25
SNU13-208ENST00000488571 UMODL1Q5DID0 1318 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 PATL2C9JE40 543 aaKnown RBP13.51□□□□□ -0.25
SNU13-208ENST00000488571 TMEM232C9JQI7 657 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 STK25O00506 426 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 APPP05067 770 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 TSPY3P0CV98 308 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 TSPY8P0CW00 308 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 CYP2C18P33260 490 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 TJAP1Q5JTD0 557 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 PSRC1Q6PGN9 363 aaPredicted RBP13.51□□□□□ -0.25
SNU13-208ENST00000488571 CXCL17Q6UXB2 119 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 RNF146Q9NTX7 359 aa13.51□□□□□ -0.25
SNU13-208ENST00000488571 CXXC1Q9P0U4 656 aaPredicted RBP13.51□□□□□ -0.25
SNU13-208ENST00000488571 GRIN2DO15399 1336 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 TLR3O15455 904 aaKnown RBP13.5□□□□□ -0.25
SNU13-208ENST00000488571 FDX1P10109 184 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 STAT2P52630 851 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 TFAP4Q01664 338 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 TNFAIP2Q03169 654 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 TMEM63BQ5T3F8 832 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 CCDC174Q6PII3 467 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 RASGRP2Q7LDG7 609 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 HERVK_113Q902F9 699 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 GPATCH3Q96I76 525 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 GMCL1Q96IK5 515 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 PRDM12Q9H4Q4 367 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 IL23AQ9NPF7 189 aa13.5□□□□□ -0.25
SNU13-208ENST00000488571 ASB14A6NK59 587 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 FOXP2O15409 715 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 PLA2G6O60733 806 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 SMPD1P17405 629 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 PPARAQ07869 468 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 ADGRE1Q14246 886 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 FSCN1Q16658 493 aaKnown RBP13.49□□□□□ -0.25
SNU13-208ENST00000488571 CCDC129Q6ZRS4 1044 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 TLK2Q86UE8 772 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 FAM160B2Q86V87 743 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 PI4K2BQ8TCG2 481 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 STAG1Q8WVM7 1258 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 CHMP4CQ96CF2 233 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 TRERF1Q96PN7 1200 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 PDGFCQ9NRA1 345 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 IL17RBQ9NRM6 502 aa13.49□□□□□ -0.25
SNU13-208ENST00000488571 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms