RNA–Protein interactions for RNA: ENST00000488407.1

FGD3-206, Transcript of FYVE, RhoGEF and PH domain containing 3, humanhuman

TSL 5

Gene FGD3, Length 462 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3-206ENST00000488407 CTAGE5O15320 804 aa13.36□□□□□ -0.27
FGD3-206ENST00000488407 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
FGD3-206ENST00000488407 TIMP1P01033 207 aa13.36□□□□□ -0.27
FGD3-206ENST00000488407 TOP1P11387 765 aaKnown RBP13.36□□□□□ -0.27
FGD3-206ENST00000488407 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
FGD3-206ENST00000488407 CNTN2Q02246 1040 aa13.36□□□□□ -0.27
FGD3-206ENST00000488407 IKQ13123 557 aaPredicted RBP13.36□□□□□ -0.27
FGD3-206ENST00000488407 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
FGD3-206ENST00000488407 TTC14Q96N46 770 aa13.36□□□□□ -0.27
FGD3-206ENST00000488407 MAF1Q9H063 256 aa13.36□□□□□ -0.27
FGD3-206ENST00000488407 HOMER2Q9NSB8 354 aa13.36□□□□□ -0.27
FGD3-206ENST00000488407 CYP39A1Q9NYL5 469 aa13.36□□□□□ -0.27
FGD3-206ENST00000488407 GNEQ9Y223 722 aaKnown RBP13.36□□□□□ -0.27
FGD3-206ENST00000488407 NMT2O60551 498 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 FGAP02671 866 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 TNFAIP2Q03169 654 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 GNASQ5JWF2 1037 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 IQSEC1Q6DN90 963 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 MFSD5Q6N075 450 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 KCTD1Q719H9 257 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 SLC43A3Q8NBI5 491 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 RNPC3Q96LT9 517 aaKnown RBP13.35□□□□□ -0.27
FGD3-206ENST00000488407 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 VTA1Q9NP79 307 aa13.35□□□□□ -0.27
FGD3-206ENST00000488407 A0A0D9SFI3 127 aa13.34□□□□□ -0.27
FGD3-206ENST00000488407 TLR3O15455 904 aaKnown RBP13.34□□□□□ -0.27
FGD3-206ENST00000488407 HSPD1P10809 573 aaKnown RBP13.34□□□□□ -0.27
FGD3-206ENST00000488407 ALAS1P13196 640 aa13.34□□□□□ -0.27
FGD3-206ENST00000488407 EPHB4P54760 987 aa13.34□□□□□ -0.27
FGD3-206ENST00000488407 MFAP1P55081 439 aaKnown RBP13.34□□□□□ -0.27
FGD3-206ENST00000488407 PPIGQ13427 754 aaKnown RBP eCLIP13.34□□□□□ -0.27
FGD3-206ENST00000488407 FAM126BQ8IXS8 530 aa13.34□□□□□ -0.27
FGD3-206ENST00000488407 FAM227BQ96M60 508 aa13.34□□□□□ -0.27
FGD3-206ENST00000488407 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
FGD3-206ENST00000488407 CCPG1Q9ULG6 757 aa13.34□□□□□ -0.27
FGD3-206ENST00000488407 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
FGD3-206ENST00000488407 ASTN1O14525 1302 aa13.34□□□□□ -0.27
FGD3-206ENST00000488407 CCDC171Q6TFL3 1326 aa13.34□□□□□ -0.27
FGD3-206ENST00000488407 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.33□□□□□ -0.28
FGD3-206ENST00000488407 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.33□□□□□ -0.28
FGD3-206ENST00000488407 ZEB2O60315 1214 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 CD4P01730 458 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 SNHG28P0DPA3 235 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 MUM1L1Q5H9M0 696 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 RASIP1Q5U651 963 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 SYDE2Q5VT97 1194 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 TAPT1Q6NXT6 567 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 TLK2Q86UE8 772 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 CDX2Q99626 313 aaPredicted RBP13.33□□□□□ -0.28
FGD3-206ENST00000488407 TMEM47Q9BQJ4 181 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 RNF41Q9H4P4 317 aaPredicted RBP13.33□□□□□ -0.28
FGD3-206ENST00000488407 INCENPQ9NQS7 918 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 ADD3Q9UEY8 706 aaKnown RBP13.33□□□□□ -0.28
FGD3-206ENST00000488407 WDR19Q8NEZ3 1342 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 LCTP09848 1927 aa13.33□□□□□ -0.28
FGD3-206ENST00000488407 LAMA2P24043 3122 aaKnown RBP13.33□□□□□ -0.28
FGD3-206ENST00000488407 PDHBP11177 359 aa13.32□□□□□ -0.28
FGD3-206ENST00000488407 FSCN1Q16658 493 aaKnown RBP13.32□□□□□ -0.28
FGD3-206ENST00000488407 CCDC96Q2M329 555 aa13.32□□□□□ -0.28
FGD3-206ENST00000488407 AKNAD1Q5T1N1 836 aa13.32□□□□□ -0.28
FGD3-206ENST00000488407 TMEM199Q8N511 208 aa13.32□□□□□ -0.28
FGD3-206ENST00000488407 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
FGD3-206ENST00000488407 TTYH1Q9H313 450 aaPredicted RBP13.32□□□□□ -0.28
FGD3-206ENST00000488407 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.31□□□□□ -0.28
FGD3-206ENST00000488407 RBM47A0AV96 593 aaKnown RBP13.31□□□□□ -0.28
FGD3-206ENST00000488407 SMPD1P17405 629 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 PDE4AP27815 886 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 ZNF543Q08ER8 600 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 NMIQ13287 307 aaPredicted RBP13.31□□□□□ -0.28
FGD3-206ENST00000488407 DUSP28Q4G0W2 176 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 GPATCH4Q5T3I0 446 aaKnown RBP13.31□□□□□ -0.28
FGD3-206ENST00000488407 PSRC1Q6PGN9 363 aaPredicted RBP13.31□□□□□ -0.28
FGD3-206ENST00000488407 MFSD6Q6ZSS7 791 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 RASGRP2Q7LDG7 609 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 ZNF589Q86UQ0 364 aaPredicted RBP13.31□□□□□ -0.28
FGD3-206ENST00000488407 DGKHQ86XP1 1220 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
FGD3-206ENST00000488407 RGS22Q8NE09 1264 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 LAMA4Q16363 1823 aa13.31□□□□□ -0.28
FGD3-206ENST00000488407 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 ALDH5A1P51649 535 aaPredicted RBP13.3□□□□□ -0.28
FGD3-206ENST00000488407 IRX5P78411 483 aaPredicted RBP13.3□□□□□ -0.28
FGD3-206ENST00000488407 ITGA7Q13683 1181 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 TTBK2Q6IQ55 1244 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 NSMFQ6X4W1 530 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
FGD3-206ENST00000488407 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 CLEC4DQ8WXI8 215 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 ANKS1AQ92625 1134 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 ESR2Q92731 530 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 FAM161BQ96MY7 647 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 MPHOSPH6Q99547 160 aaKnown RBP13.3□□□□□ -0.28
FGD3-206ENST00000488407 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.3□□□□□ -0.28
FGD3-206ENST00000488407 TOMM22Q9NS69 142 aa13.3□□□□□ -0.28
FGD3-206ENST00000488407 HIP1O00291 1037 aa13.29□□□□□ -0.28
FGD3-206ENST00000488407 NKRFO15226 690 aaKnown RBP eCLIP13.29□□□□□ -0.28
FGD3-206ENST00000488407 SDSP20132 328 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms