RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 REV3LO60673 3130 aa12.99□□□□□ -0.33
LCN2-206ENST00000488391 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
LCN2-206ENST00000488391 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.98□□□□□ -0.33
LCN2-206ENST00000488391 RFXAPO00287 272 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 NDUFB10O96000 172 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 SDSP20132 328 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 PTGS1P23219 599 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 KCNQ1P51787 676 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 TNFAIP2Q03169 654 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 ITGA7Q13683 1181 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 PPP2R2DQ66LE6 453 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 C1QTNF1Q9BXJ1 281 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 SLC4A7Q9Y6M7 1214 aa12.98□□□□□ -0.33
LCN2-206ENST00000488391 ASTN1O14525 1302 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 GRIN2DO15399 1336 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 ZBBXA8MT70 800 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 DYNC1LI2O43237 492 aaPredicted RBP12.97□□□□□ -0.33
LCN2-206ENST00000488391 ATP5JP18859 108 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 RASA1P20936 1047 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 CASC1Q6TDU7 716 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 SLC43A3Q8NBI5 491 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 NOC4LQ9BVI4 516 aaKnown RBP12.97□□□□□ -0.33
LCN2-206ENST00000488391 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.97□□□□□ -0.33
LCN2-206ENST00000488391 KATNBL1Q9H079 304 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 MKNK2Q9HBH9 465 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 SLC38A10Q9HBR0 1119 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 NYAP2Q9P242 653 aa12.97□□□□□ -0.33
LCN2-206ENST00000488391 PSMC6P62333 389 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 NKX3-2P78367 333 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 AAK1Q2M2I8 961 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 TICAM2Q86XR7 235 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 RPUSD2Q8IZ73 545 aaKnown RBP12.96□□□□□ -0.33
LCN2-206ENST00000488391 CHST13Q8NET6 341 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 SCLYQ96I15 445 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 PUS7LQ9H0K6 701 aaKnown RBP12.96□□□□□ -0.33
LCN2-206ENST00000488391 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 WNT8AQ9H1J5 351 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 CERS4Q9HA82 394 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 FBXO40Q9UH90 709 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 RBM19Q9Y4C8 960 aaKnown RBP12.96□□□□□ -0.33
LCN2-206ENST00000488391 PCDHA11Q9Y5I1 949 aa12.96□□□□□ -0.33
LCN2-206ENST00000488391 DDX49Q9Y6V7 483 aaKnown RBP12.96□□□□□ -0.33
LCN2-206ENST00000488391 MINDY4BA8MYZ0 360 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 B4GALT4O60513 344 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 CABYRO75952 493 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 ATP2A2P16615 1042 aaKnown RBP12.95□□□□□ -0.34
LCN2-206ENST00000488391 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
LCN2-206ENST00000488391 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 FSCN1Q16658 493 aaKnown RBP12.95□□□□□ -0.34
LCN2-206ENST00000488391 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.95□□□□□ -0.34
LCN2-206ENST00000488391 TLK2Q86UE8 772 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 CHMP4CQ96CF2 233 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 VWCEQ96DN2 955 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 LRFN3Q9BTN0 628 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 UPF2Q9HAU5 1272 aaKnown RBP12.95□□□□□ -0.34
LCN2-206ENST00000488391 PDGFCQ9NRA1 345 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 FEM1BQ9UK73 627 aa12.95□□□□□ -0.34
LCN2-206ENST00000488391 GNEQ9Y223 722 aaKnown RBP12.95□□□□□ -0.34
LCN2-206ENST00000488391 SOWAHBA6NEL2 793 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 SMPD1P17405 629 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 TTLL4Q14679 1199 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 TMEM63BQ5T3F8 832 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 KRT40Q6A162 431 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 EEPD1Q7L9B9 569 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 FAM133AQ8N9E0 248 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 EVI5LQ96CN4 794 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 AGBL1Q96MI9 1066 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 HAUS7Q99871 368 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 ARPP21Q9UBL0 812 aaPredicted RBP12.94□□□□□ -0.34
LCN2-206ENST00000488391 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
LCN2-206ENST00000488391 MTCH2Q9Y6C9 303 aa12.94□□□□□ -0.34
LCN2-206ENST00000488391 ASB14A6NK59 587 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 GTPBP6O43824 516 aaPredicted RBP12.93□□□□□ -0.34
LCN2-206ENST00000488391 ZEB2O60315 1214 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 PRDM1O75626 825 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 CA3P07451 260 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 CYP2C9P11712 490 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 OAZ1P54368 228 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 SBK1Q52WX2 424 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 TMEM67Q5HYA8 995 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 DEFB128Q7Z7B8 93 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 ZNF444Q8N0Y2 327 aaPredicted RBP12.93□□□□□ -0.34
LCN2-206ENST00000488391 LRRC47Q8N1G4 583 aaKnown RBP12.93□□□□□ -0.34
LCN2-206ENST00000488391 STRBPQ96SI9 672 aaKnown RBP12.93□□□□□ -0.34
LCN2-206ENST00000488391 ACAD9Q9H845 621 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 A1CFQ9NQ94 594 aaKnown RBP12.93□□□□□ -0.34
LCN2-206ENST00000488391 MYH4Q9Y623 1939 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 TRANK1O15050 2925 aa12.93□□□□□ -0.34
LCN2-206ENST00000488391 IGKV6D-41A0A0C4DH26 115 aa12.92□□□□□ -0.34
LCN2-206ENST00000488391 EPOPA6NHQ4 379 aa12.92□□□□□ -0.34
LCN2-206ENST00000488391 GSG1L2A8MUP6 293 aa12.92□□□□□ -0.34
LCN2-206ENST00000488391 TMEM232C9JQI7 657 aa12.92□□□□□ -0.34
LCN2-206ENST00000488391 HIP1O00291 1037 aa12.92□□□□□ -0.34
LCN2-206ENST00000488391 SLFN13Q68D06 897 aa12.92□□□□□ -0.34
LCN2-206ENST00000488391 IQSEC1Q6DN90 963 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms