RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	ZFR	Q96KR1	1074 aa	Known RBP	11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	ZNF236	Q9UL36	1845 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	SLC15A5	A6NIM6	579 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	EIF5B	O60841	1220 aa	Known RBP	11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	PDHB	P11177	359 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	ERCC3	P19447	782 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	CYP2B6	P20813	491 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	MCM5	P33992	734 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	RGS2	P41220	211 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	UBXN2A	P68543	259 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	KRT32	Q14532	448 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	WTAP	Q15007	396 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	GPATCH4	Q5T3I0	446 aa	Known RBP	11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	CYB5R4	Q7L1T6	521 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	RIOX2	Q8IUF8	465 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	NKX2-3	Q8TAU0	364 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	PXYLP1	Q8TE99	480 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	SH3TC2	Q8TF17	1288 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	ANKS1A	Q92625	1134 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	TEX13B	Q9BXU2	312 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	CDHR5	Q9HBB8	845 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	GPCPD1	Q9NPB8	672 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	SLC5A4	Q9NY91	659 aa		11.14	□□□□□ -0.63
PTBP3-208	ENST00000487997	FCER1A	P12319	257 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	OAZ1	P54368	228 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	MAP2K5	Q13163	448 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	TMEM67	Q5HYA8	995 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	SNRNP48	Q6IEG0	339 aa	Known RBP	11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	STOX1	Q6ZVD7	989 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	CHST3	Q7LGC8	479 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	DPP9	Q86TI2	863 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	TRMT44	Q8IYL2	757 aa	Known RBP	11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	ARMC5	Q96C12	935 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	SLC38A10	Q9HBR0	1119 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	RAVER2	Q9HCJ3	691 aa	Known RBP	11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	GJD2	Q9UKL4	321 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	PRR12	Q9ULL5	1215 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	TAF6L	Q9Y6J9	622 aa		11.13	□□□□□ -0.63
PTBP3-208	ENST00000487997	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	SOWAHB	A6NEL2	793 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	ATP2A1	O14983	1001 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	PRC1	O43663	620 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	DHX16	O60231	1041 aa	Known RBP	11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	MYC	P01106	439 aa	Predicted RBP	11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	PARP1	P09874	1014 aa	Known RBP	11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	XRCC5	P13010	732 aa	Known RBP	11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	ELN	P15502	786 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	SLC16A2	P36021	539 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	ZNF543	Q08ER8	600 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	KCTD2	Q14681	263 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	SEC23A	Q15436	765 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	ASPRV1	Q53RT3	343 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	MORN1	Q5T089	497 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	SYDE2	Q5VT97	1194 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	TTBK2	Q6IQ55	1244 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	CCDC174	Q6PII3	467 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	NFXL1	Q6ZNB6	911 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	CATIP	Q7Z7H3	387 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	TMTC2	Q8N394	836 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	TMEM87B	Q96K49	555 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	NEK1	Q96PY6	1258 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	MMP19	Q99542	508 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	APBA2	Q99767	749 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	MTA3	Q9BTC8	594 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	FBXO40	Q9UH90	709 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	PNMA2	Q9UL42	364 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	ZNF214	Q9UL59	606 aa	Predicted RBP	11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	MCM3AP	O60318	1980 aa		11.12	□□□□□ -0.63
PTBP3-208	ENST00000487997	CCDC69	A6NI79	296 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	C3orf80	F5H4A9	247 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	EPB41L2	O43491	1005 aa	Known RBP	11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	HMGCR	P04035	888 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	HMGB1	P09429	215 aa	Known RBP	11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	GOLGA8H	P0CJ92	632 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	SNHG28	P0DPA3	235 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	ADORA2A	P29274	412 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	FGD1	P98174	961 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	GRB14	Q14449	540 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	BTNL9	Q6UXG8	535 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	RASGRP2	Q7LDG7	609 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	ABRA	Q8N0Z2	381 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	CHST13	Q8NET6	341 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	REPS2	Q8NFH8	660 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	DDX11	Q96FC9	970 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	ZNF333	Q96JL9	665 aa		11.11	□□□□□ -0.63
PTBP3-208	ENST00000487997	INHA	P05111	366 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	ALAS1	P13196	640 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	HSPA4	P34932	840 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	SOX10	P56693	466 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	PRSS12	P56730	875 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	SNAP25	P60880	206 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	TKFC	Q3LXA3	575 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	TSGA10IP	Q3SY00	556 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	MFSD14C	Q5VZR4	134 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	SYNE3	Q6ZMZ3	975 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	ANKRD35	Q8N283	1001 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms