RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 REC8O95072 547 aa16.5■□□□□ 0.23
PFKFB3-213ENST00000487989 SNAI1O95863 264 aaPredicted RBP16.5■□□□□ 0.23
PFKFB3-213ENST00000487989 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
PFKFB3-213ENST00000487989 ANO1Q5XXA6 986 aa16.5■□□□□ 0.23
PFKFB3-213ENST00000487989 NECAB2Q7Z6G3 386 aa16.5■□□□□ 0.23
PFKFB3-213ENST00000487989 DIS3LQ8TF46 1054 aaKnown RBP16.5■□□□□ 0.23
PFKFB3-213ENST00000487989 CLEC4DQ8WXI8 215 aa16.5■□□□□ 0.23
PFKFB3-213ENST00000487989 PTPDC1A2A3K4 754 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 SOWAHBA6NEL2 793 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 CCDC69A6NI79 296 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 KRT32Q14532 448 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 ADCK5Q3MIX3 580 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 ZNF654Q8IZM8 581 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 NUP133Q8WUM0 1156 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 HTATIP2Q9BUP3 242 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 LRRC2Q9BYS8 371 aa16.49■□□□□ 0.23
PFKFB3-213ENST00000487989 PLXNA1Q9UIW2 1896 aa16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 ZNF865P0CJ78 1059 aaPredicted RBP16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 HSPA4P34932 840 aa16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 LIFRP42702 1097 aa16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 RNF207Q6ZRF8 634 aa16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 ARMCX2Q7L311 632 aa16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 FBXO11Q86XK2 927 aa16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 DPF3Q92784 378 aa16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 PURBQ96QR8 312 aaKnown RBP16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 ZHX1Q9UKY1 873 aaPredicted RBP16.48■□□□□ 0.23
PFKFB3-213ENST00000487989 ABCB11O95342 1321 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 ASB14A6NK59 587 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 DDAH1O94760 285 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 CALML3P27482 149 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 EXOSC10Q01780 885 aaKnown RBP16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 DHX32Q7L7V1 743 aaKnown RBP16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 CTCFLQ8NI51 663 aaPredicted RBP16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 KCNB2Q92953 911 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 MAP3K14Q99558 947 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 ABHD16BQ9H3Z7 469 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 C11orf49Q9H6J7 331 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 RIOX1Q9H6W3 641 aa16.47■□□□□ 0.23
PFKFB3-213ENST00000487989 ZBTB5O15062 677 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 HMGB1P09429 215 aaKnown RBP16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 RARBP10826 455 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 AKR1A1P14550 325 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 KIF5BP33176 963 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 RPS6P62753 249 aaKnown RBP16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 SLC35G1Q2M3R5 365 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 SLC30A10Q6XR72 485 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 ARRDC4Q8NCT1 418 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 RGS22Q8NE09 1264 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 MTMR8Q96EF0 704 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 AMNQ9BXJ7 453 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 ADD3Q9UEY8 706 aaKnown RBP16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 MRPL11Q9Y3B7 192 aaKnown RBP16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 SNX14Q9Y5W7 946 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
PFKFB3-213ENST00000487989 ASTN1O14525 1302 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 CYTH3O43739 400 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 CALM1P0DP23 149 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 CALM2P0DP24 149 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 CALM3P0DP25 149 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 GJC2Q5T442 439 aaPredicted RBP16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 SGMS1Q86VZ5 419 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 PIGSQ96S52 555 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 XPNPEP3Q9NQH7 507 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 DDX49Q9Y6V7 483 aaKnown RBP16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 PDE4DIPQ5VU43 2346 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 SMCHD1A6NHR9 2005 aa16.45■□□□□ 0.22
PFKFB3-213ENST00000487989 DNAH12Q6ZR08 3092 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 DNM1LO00429 736 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 PPP1R11O60927 126 aaPredicted RBP16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 COL6A1P12109 1028 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 RXRAP19793 462 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 GNAQP50148 359 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 CCDC144BQ3MJ40 725 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 PRPF38BQ5VTL8 546 aaKnown RBP16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 SYNE3Q6ZMZ3 975 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 MCF2L2Q86YR7 1114 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 RAB11FIP4Q86YS3 637 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 TBC1D5Q92609 795 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 JAKMIP1Q96N16 626 aaKnown RBP16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 LZTS2Q9BRK4 669 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 MAF1Q9H063 256 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 PCDHA1Q9Y5I3 950 aa16.44■□□□□ 0.22
PFKFB3-213ENST00000487989 PNMA6FA0A0J9YX94 578 aa16.43■□□□□ 0.22
PFKFB3-213ENST00000487989 KBTBD13C9JR72 458 aa16.43■□□□□ 0.22
PFKFB3-213ENST00000487989 EPB41L2O43491 1005 aaKnown RBP16.43■□□□□ 0.22
PFKFB3-213ENST00000487989 PGK1P00558 417 aa16.43■□□□□ 0.22
PFKFB3-213ENST00000487989 CPA1P15085 419 aa16.43■□□□□ 0.22
PFKFB3-213ENST00000487989 TRAF1Q13077 416 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms