RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 KLHDC9Q8NEP7 349 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ZKSCAN3Q9BRR0 538 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 UPF3AQ9H1J1 476 aaKnown RBP13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ABHD16BQ9H3Z7 469 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 RNF41Q9H4P4 317 aaPredicted RBP13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 A0A0C4DFX4 3053 aa13.21□□□□□ -0.3
RAB11FIP3-210ENST00000487899 RAD50Q92878 1312 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 B4E1Z4 1266 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 POTEB2H3BUK9 544 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ZNF213O14771 459 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 DUSP11O75319 330 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 PTGS1P23219 599 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ACLYP53396 1101 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 SLC30A10Q6XR72 485 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 SH3RF1Q7Z6J0 888 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ESR2Q92731 530 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 PURBQ96QR8 312 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 GPCPD1Q9NPB8 672 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 FAM184BQ9ULE4 1060 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 REV3LO60673 3130 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 DOCK5Q9H7D0 1870 aa13.2□□□□□ -0.3
RAB11FIP3-210ENST00000487899 MYH7BA7E2Y1 1941 aa13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 WDR19Q8NEZ3 1342 aa13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 SCN5AQ14524 2016 aa13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TRIM43BA6NCK2 446 aa13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 KDM4AO75164 1064 aa13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 GJA9P57773 515 aa13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ENAHQ8N8S7 591 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 CLEC4DQ8WXI8 215 aa13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TRIM43Q96BQ3 446 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TTC14Q96N46 770 aa13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TSEN34Q9BSV6 310 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 CPVLQ9H3G5 476 aa13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 PRDM5Q9NQX1 630 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TNKSO95271 1327 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 MOXD2PA6NHM9 499 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 C6orf222P0C671 652 aaPredicted RBP13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ITGB8P26012 769 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 NT5C2P49902 561 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 NKX3-2P78367 333 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TLE2Q04725 743 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 NSMFQ6X4W1 530 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 DGKHQ86XP1 1220 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 PNMA1Q8ND90 353 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 MORC4Q8TE76 937 aa13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP3-210ENST00000487899 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ASB14A6NK59 587 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 PQBP1O60828 265 aaKnown RBP13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 CLTBP09497 229 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 GOLGA8HP0CJ92 632 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 KCNA10Q16322 511 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 IMMTQ16891 758 aaKnown RBP13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TMEM63BQ5T3F8 832 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 GPATCH4Q5T3I0 446 aaKnown RBP13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 GPR153Q6NV75 609 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ANKRD33Q7Z3H0 272 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ANKS1AQ92625 1134 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 STARD7Q9NQZ5 370 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TAF6LQ9Y6J9 622 aa13.17□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TRANK1O15050 2925 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 KIAA0355O15063 1070 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ASGR1P07306 291 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ALDH5A1P51649 535 aaPredicted RBP13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 BAATQ14032 418 aaPredicted RBP13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 C9orf50Q5SZB4 431 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TAPT1Q6NXT6 567 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 Q7L0L9 218 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TLK2Q86UE8 772 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 BADQ92934 168 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ZSCAN10Q96SZ4 725 aaPredicted RBP13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 PDGFCQ9NRA1 345 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ZSWIM5Q9P217 1185 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 PRKAG2Q9UGJ0 569 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 CUL9Q8IWT3 2517 aa13.16□□□□□ -0.3
RAB11FIP3-210ENST00000487899 SMPD1P17405 629 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 CHMLP26374 656 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 BEX3Q00994 111 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TNFAIP2Q03169 654 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 PTH1RQ03431 593 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 FAAP100Q0VG06 881 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 SEC23AQ15436 765 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 CDC37Q16543 378 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 EEPD1Q7L9B9 569 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 NUP133Q8WUM0 1156 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 TOX2Q96NM4 488 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 VTA1Q9NP79 307 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 CTNNA3Q9UI47 895 aa13.15□□□□□ -0.3
RAB11FIP3-210ENST00000487899 ELP1O95163 1332 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 LOC102724159A0A0B4J2E5 919 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms