RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 NT5DC4Q86YG4 428 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 TMEM192Q8IY95 271 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 DDX1Q92499 740 aaKnown RBP5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 ATG4CQ96DT6 458 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 SLC6A18Q96N87 628 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 CNNM2Q9H8M5 875 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 KBTBD4Q9NVX7 518 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 A0A1W2PQJ5 194 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 DBHP09172 617 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 GSTM1P09488 218 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 ATF2P15336 505 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 HDLBPQ00341 1268 aaKnown RBP5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 RTP2Q5QGT7 225 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 BICRALQ6AI39 1079 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 FBXL19Q6PCT2 694 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 JAMLQ86YT9 394 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 ZNF654Q8IZM8 581 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 ZNF526Q8TF50 670 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 DSCC1Q9BVC3 393 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 TGIF2Q9GZN2 237 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 DUSP10Q9Y6W6 482 aa5.96□□□□□ -1.46
HMGB1P36-201ENST00000487709 AKAP8O43823 692 aaKnown RBP5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 FBLN1P23142 703 aa5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 TACR1P25103 407 aa5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 CNR2P34972 360 aa5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 MC3RP41968 323 aa5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 ZC3H6P61129 1189 aaKnown RBP5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 PAQR3Q6TCH7 311 aa5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 SAPCD2Q86UD0 394 aa5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 LRRC3Q9BY71 257 aa5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 COPRSQ9NQ92 184 aa5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 CNOT11Q9UKZ1 510 aaKnown RBP5.95□□□□□ -1.46
HMGB1P36-201ENST00000487709 FAM86C2PA6NEL3 165 aa5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 ATE1O95260 518 aa5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 CYBBP04839 570 aa5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 TNFRSF1AP19438 455 aa5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 MAGEA10P43363 369 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 CRKP46108 304 aa5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 ZXDAP98168 799 aa5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 AUHQ13825 339 aaKnown RBP5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 GK5Q6ZS86 529 aa5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 SPATA32Q96LK8 384 aa5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 ANTXR1Q9H6X2 564 aa5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 DBR1Q9UK59 544 aaKnown RBP5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 SUPT16HQ9Y5B9 1047 aaKnown RBP5.94□□□□□ -1.46
HMGB1P36-201ENST00000487709 F8W031 263 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 SRGAP3O43295 1099 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 CCNFP41002 786 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 ADAM17P78536 824 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 PRR5P85299 388 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 CLCQ05315 142 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 HLA-DQA1Q5Y7H0 255 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 ERMP1Q7Z2K6 904 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 VPS37DQ86XT2 251 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 SLC12A9Q9BXP2 914 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 SMPD4Q9NXE4 827 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 INPP5FQ9Y2H2 1132 aa5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P36-201ENST00000487709 SH3D21A4FU49 640 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 GSNP06396 782 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 NME1P15531 152 aaKnown RBP5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 MCM4P33991 863 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 EIF4A3P38919 411 aaKnown RBP5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 GJA9P57773 515 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 HTRA3P83110 453 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 SEZ6Q53EL9 994 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 C9orf131Q5VYM1 1079 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 CWF19L1Q69YN2 538 aaKnown RBP5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 KIAA0825Q8IV33 1275 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 C8orf37Q96NL8 207 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 EHMT1Q9H9B1 1298 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 CAPN10Q9HC96 672 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 IGSF5Q9NSI5 407 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 ROBO2Q9HCK4 1378 aa5.92□□□□□ -1.46
HMGB1P36-201ENST00000487709 H0Y8X5 98 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 MATN3O15232 486 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 SUV39H1O43463 412 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 NOBOXO60393 691 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 DLX2Q07687 328 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 SF3A1Q15459 793 aaKnown RBP5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 METTL16Q86W50 562 aaKnown RBP5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 CARFQ8N187 725 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 ALG3Q92685 438 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 SPON2Q9BUD6 331 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 RNF38Q9H0F5 515 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 BCAS3Q9H6U6 928 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 RXFP1Q9HBX9 757 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 PDLIM7Q9NR12 457 aa5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 DDX41Q9UJV9 622 aaKnown RBP5.91□□□□□ -1.46
HMGB1P36-201ENST00000487709 FSHBP01225 129 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 ITGB3P05106 788 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 ASGR2P07307 311 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 NCAM1P13591 858 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 ZNF394Q53GI3 561 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 LDLRAD1Q5T700 205 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 CYP2R1Q6VVX0 501 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 CCDC144CPQ8IYA2 1237 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 SLC9A7Q96T83 725 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 LNPKQ9C0E8 428 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 KCNQ5Q9NR82 932 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms