RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 STK36Q9NRP7 1315 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 IFNAR2P48551 515 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PPP2R2AP63151 447 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 SEPT2Q15019 361 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 P2RX5Q93086 422 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 YIPF3Q9GZM5 350 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ZNF609O15014 1411 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 TRAPPC10P48553 1259 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 DHX9Q08211 1270 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CNPY4Q8N129 248 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 MGARPQ8TDB4 240 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 TRIM10Q9UDY6 481 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CFAP73A6NFT4 308 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CCDC13Q8IYE1 715 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 MMGT1Q8N4V1 131 aa16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 THOC1Q96FV9 657 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PTGISQ16647 500 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 NFRKBQ6P4R8 1299 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 GBP7Q8N8V2 638 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 STX2P32856 288 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 UBE3CQ15386 1083 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 RPUSD2Q8IZ73 545 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CRNKL1Q9BZJ0 848 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 VCPKMTQ9H867 229 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 TCEAL9Q9UHQ7 104 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CAPN11Q9UMQ6 739 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 FTCDO95954 541 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 KRT14P02533 472 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 SCP2P22307 547 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 SEL1L2Q5TEA6 688 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ARHGEF2Q92974 986 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 AMFRQ9UKV5 643 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ESYT3A0FGR9 886 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PRDM1O75626 825 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 MYL1P05976 194 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 SEC24CP53992 1094 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CYB5RLQ6IPT4 315 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 NBPF10Q6P3W6 841 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CYB5D1Q6P9G0 228 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 WDR66Q8TBY9 1149 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ZIM3Q96PE6 472 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PUS7LQ9H0K6 701 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 VAT1LQ9HCJ6 419 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 FBXO2Q9UK22 296 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PRR36Q9H6K5 1346 aa16.81■□□□□ 0.28
HLA-DQB1-209ENST00000487676 USP6P35125 1406 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PDE6AP16499 860 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CCNE1P24864 410 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 GNA11P29992 359 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PGRMC1O00264 195 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 EPHA10Q5JZY3 1008 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ANKRD42Q8N9B4 389 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 SLC52A2Q9HAB3 445 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 STX8Q9UNK0 236 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 GDAQ9Y2T3 454 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CRACR2BQ8N4Y2 399 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 RNPC3Q96LT9 517 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 MLXIPQ9HAP2 919 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ATP8A1Q9Y2Q0 1164 aa16.8■□□□□ 0.28
HLA-DQB1-209ENST00000487676 SH3BGRP55822 239 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 KDM7AQ6ZMT4 941 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CYFIP2Q96F07 1278 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 DCAF5Q96JK2 942 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PBKQ96KB5 322 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 LSM14BQ9BX40 385 aaKnown RBP16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CETN3O15182 167 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ZNF18P17022 549 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 HOOK2Q96ED9 719 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CIAO1O76071 339 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 IGKV5-2P06315 115 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 MAGEF1Q9HAY2 307 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CD2APQ9Y5K6 639 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ADGRB1O14514 1584 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CCDC65Q8IXS2 484 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 HELBQ8NG08 1087 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 MYCBPAPQ8TBZ2 947 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PSMD1Q99460 953 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ELAC2Q9BQ52 826 aaKnown RBP16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 TEX13AQ9BXU3 409 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 POLD4Q9HCU8 107 aa16.79■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CCDC160A6NGH7 325 aa16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 FSBPO95073 299 aa16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PPARAQ07869 468 aa16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 MAN2A1Q16706 1144 aa16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 CHMP6Q96FZ7 201 aa16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 TPX2Q9ULW0 747 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 MAGOHP61326 146 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 ERVK-24P63145 666 aa16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 HDLBPQ00341 1268 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PAPD7Q5XG87 772 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.78■□□□□ 0.28
HLA-DQB1-209ENST00000487676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms