RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 MYADML2A6NDP7 307 aa27.71■■■□□ 2.03
PLOD3-215ENST00000487563 ADCY6O43306 1168 aa27.71■■■□□ 2.03
PLOD3-215ENST00000487563 CLTBP09497 229 aa27.71■■■□□ 2.03
PLOD3-215ENST00000487563 CST5P28325 142 aaPredicted RBP27.71■■■□□ 2.03
PLOD3-215ENST00000487563 NT5C2P49902 561 aa27.71■■■□□ 2.03
PLOD3-215ENST00000487563 ZNF543Q08ER8 600 aa27.71■■■□□ 2.03
PLOD3-215ENST00000487563 IMMTQ16891 758 aaKnown RBP27.71■■■□□ 2.03
PLOD3-215ENST00000487563 BADQ92934 168 aa27.71■■■□□ 2.03
PLOD3-215ENST00000487563 GLT1D1Q96MS3 346 aa27.71■■■□□ 2.03
PLOD3-215ENST00000487563 KATNBL1Q9H079 304 aa27.71■■■□□ 2.03
PLOD3-215ENST00000487563 CTNNA3Q9UI47 895 aa27.71■■■□□ 2.03
PLOD3-215ENST00000487563 KDM4AO75164 1064 aa27.7■■■□□ 2.02
PLOD3-215ENST00000487563 IRX6P78412 446 aaPredicted RBP27.7■■■□□ 2.02
PLOD3-215ENST00000487563 CCDC178Q5BJE1 867 aa27.7■■■□□ 2.02
PLOD3-215ENST00000487563 SH3RF1Q7Z6J0 888 aa27.7■■■□□ 2.02
PLOD3-215ENST00000487563 UPF3AQ9H1J1 476 aaKnown RBP27.7■■■□□ 2.02
PLOD3-215ENST00000487563 PNMA2Q9UL42 364 aa27.7■■■□□ 2.02
PLOD3-215ENST00000487563 TRIM43BA6NCK2 446 aa27.69■■■□□ 2.02
PLOD3-215ENST00000487563 GJA9P57773 515 aa27.69■■■□□ 2.02
PLOD3-215ENST00000487563 TNFAIP2Q03169 654 aa27.69■■■□□ 2.02
PLOD3-215ENST00000487563 GNASQ5JWF2 1037 aa27.69■■■□□ 2.02
PLOD3-215ENST00000487563 DGKHQ86XP1 1220 aa27.69■■■□□ 2.02
PLOD3-215ENST00000487563 VTI1AQ96AJ9 217 aa27.69■■■□□ 2.02
PLOD3-215ENST00000487563 TRIM43Q96BQ3 446 aaPredicted RBP27.69■■■□□ 2.02
PLOD3-215ENST00000487563 DCDC2CA8MYV0 355 aa27.68■■■□□ 2.02
PLOD3-215ENST00000487563 B4E1Z4 1266 aa27.68■■■□□ 2.02
PLOD3-215ENST00000487563 ASGR1P07306 291 aa27.68■■■□□ 2.02
PLOD3-215ENST00000487563 IRX5P78411 483 aaPredicted RBP27.68■■■□□ 2.02
PLOD3-215ENST00000487563 GPATCH4Q5T3I0 446 aaKnown RBP27.68■■■□□ 2.02
PLOD3-215ENST00000487563 CCSAPQ6IQ19 270 aaPredicted RBP27.68■■■□□ 2.02
PLOD3-215ENST00000487563 DEFB123Q8N688 67 aa27.68■■■□□ 2.02
PLOD3-215ENST00000487563 KAT14Q9H8E8 782 aa27.68■■■□□ 2.02
PLOD3-215ENST00000487563 ADD3Q9UEY8 706 aaKnown RBP27.68■■■□□ 2.02
PLOD3-215ENST00000487563 LRRC37A2A6NM11 1700 aa27.67■■■□□ 2.02
PLOD3-215ENST00000487563 PTPDC1A2A3K4 754 aa27.67■■■□□ 2.02
PLOD3-215ENST00000487563 NFIBO00712 420 aa27.67■■■□□ 2.02
PLOD3-215ENST00000487563 SNHG28P0DPA3 235 aa27.67■■■□□ 2.02
PLOD3-215ENST00000487563 PDE4AP27815 886 aa27.67■■■□□ 2.02
PLOD3-215ENST00000487563 BAATQ14032 418 aaPredicted RBP27.67■■■□□ 2.02
PLOD3-215ENST00000487563 TTC22Q5TAA0 569 aa27.67■■■□□ 2.02
PLOD3-215ENST00000487563 EEPD1Q7L9B9 569 aa27.67■■■□□ 2.02
PLOD3-215ENST00000487563 TMEM39AQ9NV64 488 aa27.67■■■□□ 2.02
PLOD3-215ENST00000487563 ASTN1O14525 1302 aa27.67■■■□□ 2.02
PLOD3-215ENST00000487563 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.66■■■□□ 2.02
PLOD3-215ENST00000487563 RAG1P15918 1043 aa27.66■■■□□ 2.02
PLOD3-215ENST00000487563 FBXO16Q8IX29 292 aaPredicted RBP27.66■■■□□ 2.02
PLOD3-215ENST00000487563 PNMA1Q8ND90 353 aa27.66■■■□□ 2.02
PLOD3-215ENST00000487563 KRT23Q9C075 422 aa27.66■■■□□ 2.02
PLOD3-215ENST00000487563 AP5M1Q9H0R1 490 aa27.66■■■□□ 2.02
PLOD3-215ENST00000487563 DDX49Q9Y6V7 483 aaKnown RBP27.66■■■□□ 2.02
PLOD3-215ENST00000487563 ELP1O95163 1332 aa27.66■■■□□ 2.02
PLOD3-215ENST00000487563 MROH7Q68CQ1 1323 aa27.66■■■□□ 2.02
PLOD3-215ENST00000487563 GOLGA8HP0CJ92 632 aa27.65■■■□□ 2.02
PLOD3-215ENST00000487563 Q7L0L9 218 aa27.65■■■□□ 2.02
PLOD3-215ENST00000487563 ANKRD33Q7Z3H0 272 aa27.65■■■□□ 2.02
PLOD3-215ENST00000487563 TLK2Q86UE8 772 aa27.65■■■□□ 2.02
PLOD3-215ENST00000487563 TOX2Q96NM4 488 aa27.65■■■□□ 2.02
PLOD3-215ENST00000487563 PURBQ96QR8 312 aaKnown RBP27.65■■■□□ 2.02
PLOD3-215ENST00000487563 ZSCAN10Q96SZ4 725 aaPredicted RBP27.65■■■□□ 2.02
PLOD3-215ENST00000487563 CNNM2Q9H8M5 875 aa27.65■■■□□ 2.02
PLOD3-215ENST00000487563 KIAA0355O15063 1070 aa27.64■■■□□ 2.02
PLOD3-215ENST00000487563 GSPT1P15170 499 aaKnown RBP27.64■■■□□ 2.02
PLOD3-215ENST00000487563 CALML3P27482 149 aa27.64■■■□□ 2.02
PLOD3-215ENST00000487563 UBAC1Q9BSL1 405 aa27.64■■■□□ 2.02
PLOD3-215ENST00000487563 VTA1Q9NP79 307 aa27.64■■■□□ 2.02
PLOD3-215ENST00000487563 WDR19Q8NEZ3 1342 aa27.64■■■□□ 2.01
PLOD3-215ENST00000487563 A0A0U1RQG5 324 aaPredicted RBP27.63■■■□□ 2.01
PLOD3-215ENST00000487563 ALDH5A1P51649 535 aaPredicted RBP27.63■■■□□ 2.01
PLOD3-215ENST00000487563 BEX3Q00994 111 aa27.63■■■□□ 2.01
PLOD3-215ENST00000487563 SHHQ15465 462 aa27.63■■■□□ 2.01
PLOD3-215ENST00000487563 SLC30A10Q6XR72 485 aa27.63■■■□□ 2.01
PLOD3-215ENST00000487563 RNF207Q6ZRF8 634 aa27.63■■■□□ 2.01
PLOD3-215ENST00000487563 PDGFCQ9NRA1 345 aa27.63■■■□□ 2.01
PLOD3-215ENST00000487563 TNKSO95271 1327 aa27.63■■■□□ 2.01
PLOD3-215ENST00000487563 RAD50Q92878 1312 aa27.63■■■□□ 2.01
PLOD3-215ENST00000487563 LCTP09848 1927 aa27.63■■■□□ 2.01
PLOD3-215ENST00000487563 FAAP100Q0VG06 881 aa27.62■■■□□ 2.01
PLOD3-215ENST00000487563 USH1GQ495M9 461 aa27.62■■■□□ 2.01
PLOD3-215ENST00000487563 C9orf50Q5SZB4 431 aa27.62■■■□□ 2.01
PLOD3-215ENST00000487563 IQSEC1Q6DN90 963 aa27.62■■■□□ 2.01
PLOD3-215ENST00000487563 ENAHQ8N8S7 591 aaPredicted RBP27.62■■■□□ 2.01
PLOD3-215ENST00000487563 RUFY2Q8WXA3 655 aa27.62■■■□□ 2.01
PLOD3-215ENST00000487563 CLEC4DQ8WXI8 215 aa27.62■■■□□ 2.01
PLOD3-215ENST00000487563 MPHOSPH6Q99547 160 aaKnown RBP27.62■■■□□ 2.01
PLOD3-215ENST00000487563 UBA5Q9GZZ9 404 aa27.62■■■□□ 2.01
PLOD3-215ENST00000487563 ZSWIM5Q9P217 1185 aa27.62■■■□□ 2.01
PLOD3-215ENST00000487563 GNEQ9Y223 722 aaKnown RBP27.62■■■□□ 2.01
PLOD3-215ENST00000487563 DYNC1LI2O43237 492 aaPredicted RBP27.61■■■□□ 2.01
PLOD3-215ENST00000487563 SMPD1P17405 629 aa27.61■■■□□ 2.01
PLOD3-215ENST00000487563 ITGB8P26012 769 aa27.61■■■□□ 2.01
PLOD3-215ENST00000487563 FSCN1Q16658 493 aaKnown RBP27.61■■■□□ 2.01
PLOD3-215ENST00000487563 ASPRV1Q53RT3 343 aa27.61■■■□□ 2.01
PLOD3-215ENST00000487563 KIAA1211Q6ZU35 1233 aa27.61■■■□□ 2.01
PLOD3-215ENST00000487563 IL25Q9H293 177 aa27.61■■■□□ 2.01
PLOD3-215ENST00000487563 CPVLQ9H3G5 476 aa27.61■■■□□ 2.01
PLOD3-215ENST00000487563 LOC102724159A0A0B4J2E5 919 aa27.6■■■□□ 2.01
PLOD3-215ENST00000487563 ARVCFO00192 962 aa27.6■■■□□ 2.01
PLOD3-215ENST00000487563 CTAGE5O15320 804 aa27.6■■■□□ 2.01
PLOD3-215ENST00000487563 DHX16O60231 1041 aaKnown RBP27.6■■■□□ 2.01
PLOD3-215ENST00000487563 ZEB2O60315 1214 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms