RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 CNTN2Q02246 1040 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 SLFNL1Q499Z3 407 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 KRT40Q6A162 431 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 CTR9Q6PD62 1173 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 FTSJ3Q8IY81 847 aaKnown RBP18.23■□□□□ 0.51
NME1-208ENST00000487481 PHOSPHO2Q8TCD6 241 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 RHPN1Q8TCX5 695 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 KHSRPQ92945 711 aaKnown RBP eCLIP18.23■□□□□ 0.51
NME1-208ENST00000487481 ALDH8A1Q9H2A2 487 aaPredicted RBP18.23■□□□□ 0.51
NME1-208ENST00000487481 PAG1Q9NWQ8 432 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 FEM1BQ9UK73 627 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 Q9Y3F1 56 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 TANC1Q9C0D5 1861 aa18.22■□□□□ 0.51
NME1-208ENST00000487481 PI4K2BG5E9Z4 385 aa18.22■□□□□ 0.51
NME1-208ENST00000487481 SUPT20HL2P0C7V6 817 aa18.22■□□□□ 0.51
NME1-208ENST00000487481 PSMC6P62333 389 aa18.22■□□□□ 0.51
NME1-208ENST00000487481 TAP1Q03518 808 aa18.22■□□□□ 0.51
NME1-208ENST00000487481 CLASRPQ8N2M8 674 aaKnown RBP18.22■□□□□ 0.51
NME1-208ENST00000487481 ARNTL2Q8WYA1 636 aa18.22■□□□□ 0.51
NME1-208ENST00000487481 ACAD9Q9H845 621 aa18.22■□□□□ 0.51
NME1-208ENST00000487481 HOMER2Q9NSB8 354 aa18.22■□□□□ 0.51
NME1-208ENST00000487481 SLC4A4Q9Y6R1 1079 aa18.22■□□□□ 0.51
NME1-208ENST00000487481 DYNC1LI2O43237 492 aaPredicted RBP18.21■□□□□ 0.51
NME1-208ENST00000487481 FDX1P10109 184 aa18.21■□□□□ 0.51
NME1-208ENST00000487481 SMPD1P17405 629 aa18.21■□□□□ 0.51
NME1-208ENST00000487481 RASA1P20936 1047 aa18.21■□□□□ 0.51
NME1-208ENST00000487481 DEFB128Q7Z7B8 93 aa18.21■□□□□ 0.51
NME1-208ENST00000487481 ALYREFQ86V81 257 aaKnown RBP18.21■□□□□ 0.51
NME1-208ENST00000487481 A1CFQ9NQ94 594 aaKnown RBP18.21■□□□□ 0.51
NME1-208ENST00000487481 SYNPO2Q9UMS6 1093 aa18.21■□□□□ 0.51
NME1-208ENST00000487481 SOWAHBA6NEL2 793 aa18.2■□□□□ 0.5
NME1-208ENST00000487481 KIF28PB7ZC32 967 aa18.2■□□□□ 0.5
NME1-208ENST00000487481 IFIT2P09913 472 aaKnown RBP18.2■□□□□ 0.5
NME1-208ENST00000487481 RFC2P35250 354 aa18.2■□□□□ 0.5
NME1-208ENST00000487481 UBE3CQ15386 1083 aa18.2■□□□□ 0.5
NME1-208ENST00000487481 IQSEC1Q6DN90 963 aa18.2■□□□□ 0.5
NME1-208ENST00000487481 COG6Q9Y2V7 657 aa18.2■□□□□ 0.5
NME1-208ENST00000487481 TNKSO95271 1327 aa18.2■□□□□ 0.5
NME1-208ENST00000487481 ARHGEF15O94989 841 aa18.19■□□□□ 0.5
NME1-208ENST00000487481 CYP2C9P11712 490 aa18.19■□□□□ 0.5
NME1-208ENST00000487481 PTGS1P23219 599 aa18.19■□□□□ 0.5
NME1-208ENST00000487481 GRB10Q13322 594 aa18.19■□□□□ 0.5
NME1-208ENST00000487481 HERC6Q8IVU3 1022 aa18.19■□□□□ 0.5
NME1-208ENST00000487481 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
NME1-208ENST00000487481 KIF1BPQ96EK5 621 aa18.19■□□□□ 0.5
NME1-208ENST00000487481 MKNK2Q9HBH9 465 aa18.19■□□□□ 0.5
NME1-208ENST00000487481 RNF146Q9NTX7 359 aa18.19■□□□□ 0.5
NME1-208ENST00000487481 TRMT13Q9NUP7 481 aaKnown RBP18.19■□□□□ 0.5
NME1-208ENST00000487481 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
NME1-208ENST00000487481 IGKV6D-41A0A0C4DH26 115 aa18.18■□□□□ 0.5
NME1-208ENST00000487481 PRR33A8MZF0 331 aa18.18■□□□□ 0.5
NME1-208ENST00000487481 TKFCQ3LXA3 575 aa18.18■□□□□ 0.5
NME1-208ENST00000487481 SBK1Q52WX2 424 aa18.18■□□□□ 0.5
NME1-208ENST00000487481 TAPT1Q6NXT6 567 aa18.18■□□□□ 0.5
NME1-208ENST00000487481 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
NME1-208ENST00000487481 GMCL1P1Q8NEA9 526 aa18.18■□□□□ 0.5
NME1-208ENST00000487481 MKL1Q969V6 931 aa18.18■□□□□ 0.5
NME1-208ENST00000487481 PDGFCQ9NRA1 345 aa18.18■□□□□ 0.5
NME1-208ENST00000487481 SCN10AQ9Y5Y9 1956 aa18.18■□□□□ 0.5
NME1-208ENST00000487481 TET1Q8NFU7 2136 aa18.17■□□□□ 0.5
NME1-208ENST00000487481 LPXNO60711 386 aa18.17■□□□□ 0.5
NME1-208ENST00000487481 RLBP1P12271 317 aa18.17■□□□□ 0.5
NME1-208ENST00000487481 BOLA2Q9H3K6 86 aa18.17■□□□□ 0.5
NME1-208ENST00000487481 VTA1Q9NP79 307 aa18.17■□□□□ 0.5
NME1-208ENST00000487481 CD320Q9NPF0 282 aa18.17■□□□□ 0.5
NME1-208ENST00000487481 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
NME1-208ENST00000487481 LMCD1Q9NZU5 365 aa18.17■□□□□ 0.5
NME1-208ENST00000487481 LCTP09848 1927 aa18.17■□□□□ 0.5
NME1-208ENST00000487481 PTPRSQ13332 1948 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 PITPNM1O00562 1244 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 BAIAP3O94812 1187 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 CHGBP05060 677 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 BMP3P12645 472 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 ATP5JP18859 108 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 STAT2P52630 851 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 EEPD1Q7L9B9 569 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 LRRC47Q8N1G4 583 aaKnown RBP18.16■□□□□ 0.5
NME1-208ENST00000487481 CEP95Q96GE4 821 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 HAUS7Q99871 368 aa18.16■□□□□ 0.5
NME1-208ENST00000487481 PUS7LQ9H0K6 701 aaKnown RBP18.16■□□□□ 0.5
NME1-208ENST00000487481 TTLL1O95922 423 aa18.15■□□□□ 0.5
NME1-208ENST00000487481 PURAQ00577 322 aaKnown RBP18.15■□□□□ 0.5
NME1-208ENST00000487481 DUSP28Q4G0W2 176 aa18.15■□□□□ 0.5
NME1-208ENST00000487481 ZSCAN25Q6NSZ9 544 aa18.15■□□□□ 0.5
NME1-208ENST00000487481 GIMAP6Q6P9H5 292 aa18.15■□□□□ 0.5
NME1-208ENST00000487481 TRERF1Q96PN7 1200 aa18.15■□□□□ 0.5
NME1-208ENST00000487481 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
NME1-208ENST00000487481 MTMR4Q9NYA4 1195 aa18.15■□□□□ 0.5
NME1-208ENST00000487481 ZNF536O15090 1300 aa18.15■□□□□ 0.5
NME1-208ENST00000487481 IQCF3P0C7M6 154 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 CPT1AP50416 773 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 TMEM63BQ5T3F8 832 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 SLFN13Q68D06 897 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 KIAA1211Q6ZU35 1233 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 FAM160B2Q86V87 743 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 STK11IPQ8N1F8 1099 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 RETREG2Q8NC44 543 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 MORC4Q8TE76 937 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 FTOQ9C0B1 505 aaKnown RBP eCLIP18.14■□□□□ 0.495e-9■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms