RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ANP32CO43423 234 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 RNGTTO60942 597 aaKnown RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 U2AF1L5P0DN76 240 aaPredicted RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 HCLS1P14317 486 aaPredicted RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 ASPAP45381 313 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 RGS19P49795 217 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 U2AF1Q01081 240 aaKnown RBP eCLIP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 NRG1Q02297 640 aaPredicted RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 LRRFIP1Q32MZ4 808 aaKnown RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 PLEKHO1Q53GL0 409 aaPredicted RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 TNNI3KQ59H18 835 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 FAM169BQ8N8A8 192 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 RBBP8NLQ8NC74 664 aaPredicted RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 C2CD4AQ8NCU7 369 aaPredicted RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 ZNF507Q8TCN5 953 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 PHACTR3Q96KR7 559 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 KLHL3Q9UH77 587 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 ADAM30Q9UKF2 790 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 NUDCQ9Y266 331 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 ACTL7BQ9Y614 415 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 FAM208AQ9UK61 1670 aaKnown RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 HSPA1AP0DMV8 641 aaKnown RBP8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 HSPA1BP0DMV9 641 aaKnown RBP8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 MTHFSDQ2M296 383 aaKnown RBP8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 TMEM201Q5SNT2 666 aa8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 CDC37L1Q7L3B6 337 aa8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 HNRNPLLQ8WVV9 542 aaKnown RBP8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 WFDC12Q8WWY7 111 aa8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 CEP41Q9BYV8 373 aa8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 SSU72Q9NP77 194 aaKnown RBP8.13□□□□□ -1.11
RTFDC1-209ENST00000487211 MEIS3P2A8K0S8 358 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 GAS2O43903 313 aaKnown RBP8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 NEFMP07197 916 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 PHKG2P15735 406 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 NOS3P29474 1203 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 PRKAR2BP31323 418 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 NTF4P34130 210 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 PREPP48147 710 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 PPP2R5EQ16537 467 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 AMOTQ4VCS5 1084 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 RUFY4Q6ZNE9 571 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 HID1Q8IV36 788 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 IFNL2Q8IZJ0 200 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 TMEM40Q8WWA1 233 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 ACSF2Q96CM8 615 aaPredicted RBP8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 PLEKHF1Q96S99 279 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 TRIM55Q9BYV6 548 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 GSX1Q9H4S2 264 aaPredicted RBP8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 FAM105AQ9NUU6 356 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 GMIPQ9P107 970 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 A0A0C4DFX4 3053 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 PARP4Q9UKK3 1724 aaKnown RBP8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 BCL9O00512 1426 aa8.12□□□□□ -1.11
RTFDC1-209ENST00000487211 PCDH11XQ9BZA7 1347 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 PCDH11YQ9BZA8 1340 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 SLC22A31A6NKX4 558 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 DNAJA2O60884 412 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 USP11P51784 963 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 OVOS1Q6IE37 1185 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 ZNF530Q6P9A1 599 aaPredicted RBP8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 FAM13CQ8NE31 585 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 ISL2Q96A47 359 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 FBRSQ9HAH7 460 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 TJP2Q9UDY2 1190 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 LRRC37A3O60309 1634 aa8.11□□□□□ -1.11
RTFDC1-209ENST00000487211 UPK3BL1B0FP48 263 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 CHURC1-FNTBB4DL54 471 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 KLF4O43474 513 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 RAB6AP20340 208 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 ADGRE1Q14246 886 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 MBTPS1Q14703 1052 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 CCDC144BQ3MJ40 725 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 ARSHQ5FYA8 562 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 Q6ZS46 218 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 UBE3DQ7Z6J8 389 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 ALYREFQ86V81 257 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 SMYD4Q8IYR2 804 aaPredicted RBP8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 KCT2Q8NC54 265 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 ATG4CQ96DT6 458 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 TMEM87BQ96K49 555 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 UBL7Q96S82 380 aaPredicted RBP8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 OSBPL2Q9H1P3 480 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 ACTR10Q9NZ32 417 aa8.1□□□□□ -1.11
RTFDC1-209ENST00000487211 PLSCR1O15162 318 aa8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 YARSP54577 528 aaKnown RBP8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 SLC6A19Q695T7 634 aa8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 NLRC3Q7RTR2 1065 aa8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 MCATQ8IVS2 390 aaKnown RBP8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 IL17REQ8NFR9 667 aa8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 PNISRQ8TF01 805 aaKnown RBP8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 PIGBQ92521 554 aa8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 SYTL4Q96C24 671 aaPredicted RBP8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 DCAF5Q96JK2 942 aa8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 TM9SF2Q99805 663 aa8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 TNKS2Q9H2K2 1166 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms