RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 ATAD5Q96QE3 1844 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 ABCB11O95342 1321 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 DOCK1Q14185 1865 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 SCN4AP35499 1836 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 USP2O75604 605 aaPredicted RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 ZNF202O95125 648 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 CAVIN2O95810 425 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 GCFC2P16383 781 aaKnown RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 MCM7P33993 719 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 LONP1P36776 959 aaKnown RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 TXLNAP40222 546 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 BACE1P56817 501 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 MAP3K9P80192 1104 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 SPP2Q13103 211 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 MTMR2Q13614 643 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 ZRSR1Q15695 479 aaKnown RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 CAMK4Q16566 473 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 LETM2Q2VYF4 491 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 NOM1Q5C9Z4 860 aaKnown RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 KIAA1755Q5JYT7 1200 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 JAKMIP3Q5VZ66 844 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 KANK3Q6NY19 840 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 SASS6Q6UVJ0 657 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 DTHD1Q6ZMT9 781 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 KRT26Q7Z3Y9 468 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 GAS2L3Q86XJ1 694 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 RBM46Q8TBY0 533 aaKnown RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 ANP32BQ92688 251 aaKnown RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 ZKSCAN4Q969J2 545 aaPredicted RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 C12orf42Q96LP6 360 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 CLIC6Q96NY7 704 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 SLF1Q9BQI6 1058 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 GLIS2Q9BZE0 524 aaPredicted RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 CSRNP2Q9H175 543 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 TAF1DQ9H5J8 278 aaPredicted RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 TMOD4Q9NZQ9 345 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 USP25Q9UHP3 1055 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 KCNH3Q9ULD8 1083 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 MRPL11Q9Y3B7 192 aaKnown RBP7□□□□□ -1.29
VAMP3-203ENST00000487194 UTRNP46939 3433 aa7□□□□□ -1.29
VAMP3-203ENST00000487194 VWA3AA6NCI4 1184 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 UNCXA6NJT0 531 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 SPDYE3A6NKU9 549 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 ADM5C9JUS6 153 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 PIK3CDO00329 1044 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 ADAMTS3O15072 1205 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 NEMFO60524 1076 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 CCNT1O60563 726 aaKnown RBP6.99□□□□□ -1.29
VAMP3-203ENST00000487194 ZBED4O75132 1171 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 ICAM1P05362 532 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 OR52Z1P0C646 297 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 VCAM1P19320 739 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 USP11P51784 963 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 USH1GQ495M9 461 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 PRAMEF18Q5VWM3 479 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 PPP4R3AQ6IN85 833 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 CCDC174Q6PII3 467 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 MOXD1Q6UVY6 613 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 CCDC84Q86UT8 332 aaPredicted RBP6.99□□□□□ -1.29
VAMP3-203ENST00000487194 MCF2L2Q86YR7 1114 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 SAMD3Q8N6K7 520 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 C4orf32Q8N8J7 132 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 CDCA5Q96FF9 252 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 AK8Q96MA6 479 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 FUCA2Q9BTY2 467 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 RAB34Q9BZG1 259 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 TANGO6Q9C0B7 1094 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 EHMT1Q9H9B1 1298 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 EMILIN3Q9NT22 766 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 TMEM260Q9NX78 707 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.99□□□□□ -1.29
VAMP3-203ENST00000487194 PPP1R9AQ9ULJ8 1098 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 CTDP1Q9Y5B0 961 aaPredicted RBP6.99□□□□□ -1.29
VAMP3-203ENST00000487194 ZHX2Q9Y6X8 837 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 SSC5DA1L4H1 1573 aa6.99□□□□□ -1.29
VAMP3-203ENST00000487194 GCOM1H8Y6P7 765 aaPredicted RBP6.98□□□□□ -1.29
VAMP3-203ENST00000487194 WNT7AO00755 349 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 MEIS2O14770 477 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 FLOT1O75955 427 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 POLR2MP0CAP2 368 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 SNAP25P60880 206 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 GRIN1Q05586 938 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 PPATQ06203 517 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 TYRO3Q06418 890 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 VGLL4Q14135 290 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 STX1AQ16623 288 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 UBE2SQ16763 222 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 TMEM266Q2M3C6 531 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 EAPPQ56P03 285 aaPredicted RBP6.98□□□□□ -1.29
VAMP3-203ENST00000487194 SH3D19Q5HYK7 790 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 KRBA2Q6ZNG9 492 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 ARMC9Q7Z3E5 817 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 LDHDQ86WU2 507 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 CKAP2LQ8IYA6 745 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 CEP57L1Q8IYX8 460 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 ANKRD13AQ8IZ07 590 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 CNNM3Q8NE01 707 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 ANO3Q9BYT9 981 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 MAF1Q9H063 256 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 337 ms