RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 FSHBP01225 129 aa5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 KRTAP1-1Q07627 177 aa5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 TARBP2Q15633 366 aaKnown RBP5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 FAM196AQ6ZSG2 479 aa5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 RELL1Q8IUW5 271 aa5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 ATG4CQ96DT6 458 aa5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 LNPKQ9C0E8 428 aa5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 CNNM2Q9H8M5 875 aa5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 SMPD4Q9NXE4 827 aa5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 PMF1-BGLAPU3KQ54 211 aa5.74□□□□□ -1.49
SNRNP27-204ENST00000487029 CLEC3AO75596 197 aa5.73□□□□□ -1.49
SNRNP27-204ENST00000487029 PRR5P85299 388 aa5.73□□□□□ -1.49
SNRNP27-204ENST00000487029 PAQR3Q6TCH7 311 aa5.73□□□□□ -1.49
SNRNP27-204ENST00000487029 EAF1Q96JC9 268 aaPredicted RBP5.73□□□□□ -1.49
SNRNP27-204ENST00000487029 SRGAP3O43295 1099 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 ATE1O95260 518 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 CYBBP04839 570 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 ZNF76P36508 570 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 HDLBPQ00341 1268 aaKnown RBP5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 FANCCQ00597 558 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 RAD51AP2Q09MP3 1159 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 FBXL19Q6PCT2 694 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 CARFQ8N187 725 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 RNF34Q969K3 372 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 SLC12A9Q9BXP2 914 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 SCAND2PQ9GZW5 306 aaPredicted RBP5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 ANTXR1Q9H6X2 564 aa5.72□□□□□ -1.49
SNRNP27-204ENST00000487029 OVOL3O00110 214 aa5.71□□□□□ -1.5
SNRNP27-204ENST00000487029 ENDOUP21128 410 aaKnown RBP5.71□□□□□ -1.5
SNRNP27-204ENST00000487029 CRKP46108 304 aa5.71□□□□□ -1.5
SNRNP27-204ENST00000487029 MLECQ14165 292 aa5.71□□□□□ -1.5
SNRNP27-204ENST00000487029 NLRC3Q7RTR2 1065 aa5.71□□□□□ -1.5
SNRNP27-204ENST00000487029 NOX5Q96PH1 765 aa5.71□□□□□ -1.5
SNRNP27-204ENST00000487029 BCAS3Q9H6U6 928 aa5.71□□□□□ -1.5
SNRNP27-204ENST00000487029 FBXL21Q9UKT6 434 aa5.71□□□□□ -1.5
SNRNP27-204ENST00000487029 F8W031 263 aaPredicted RBP5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 SHOXO15266 292 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 ASGR2P07307 311 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 GSTM1P09488 218 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 ZNF20P17024 532 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 AUHQ13825 339 aaKnown RBP5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 CPZQ66K79 652 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 BICRALQ6AI39 1079 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 METTL16Q86W50 562 aaKnown RBP5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 SLC6A18Q96N87 628 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 SORCS2Q96PQ0 1159 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 LRRC3Q9BY71 257 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 MKRN2Q9H000 416 aaKnown RBP5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 RXFP1Q9HBX9 757 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 COPRSQ9NQ92 184 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 KBTBD4Q9NVX7 518 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 SPATA6Q9NWH7 488 aaPredicted RBP5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 FAN1Q9Y2M0 1017 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 PCDHB12Q9Y5F1 795 aa5.7□□□□□ -1.5
SNRNP27-204ENST00000487029 A0A1W2PQ27 194 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 A0A1W2PQ64 194 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 A0A1W2PQC6 194 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 A0A1W2PQD8 194 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 C1QTNF3-AMACRE9PGA6 284 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 GREM1O60565 184 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 TACR1P25103 407 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 ERCC5P28715 1186 aaPredicted RBP5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 CLCQ05315 142 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 CWF19L2Q2TBE0 894 aaKnown RBP5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 C9orf131Q5VYM1 1079 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 ZNF761Q86XN6 746 aaPredicted RBP5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 NT5DC4Q86YG4 428 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 C1QTNF3Q9BXJ4 246 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 RNF38Q9H0F5 515 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 EHMT1Q9H9B1 1298 aa5.69□□□□□ -1.5
SNRNP27-204ENST00000487029 NCAM1P13591 858 aa5.68□□□□□ -1.5
SNRNP27-204ENST00000487029 HLA-DQA1Q5Y7H0 255 aa5.68□□□□□ -1.5
SNRNP27-204ENST00000487029 HS2ST1Q7LGA3 356 aa5.68□□□□□ -1.5
SNRNP27-204ENST00000487029 B3GNT8Q7Z7M8 397 aa5.68□□□□□ -1.5
SNRNP27-204ENST00000487029 JAMLQ86YT9 394 aa5.68□□□□□ -1.5
SNRNP27-204ENST00000487029 NAT16Q8N8M0 369 aa5.68□□□□□ -1.5
SNRNP27-204ENST00000487029 PDLIM7Q9NR12 457 aa5.68□□□□□ -1.5
SNRNP27-204ENST00000487029 KCNQ5Q9NR82 932 aa5.68□□□□□ -1.5
SNRNP27-204ENST00000487029 SRRDQ9UH36 339 aa5.68□□□□□ -1.5
SNRNP27-204ENST00000487029 C9IYK1 514 aa5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 GSNP06396 782 aa5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 NME1P15531 152 aaKnown RBP5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 CCNFP41002 786 aa5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 GJA9P57773 515 aa5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 ZC3H6P61129 1189 aaKnown RBP5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 TBC1D10BQ4KMP7 808 aaPredicted RBP5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 Q8N1X5 172 aa5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 LOXL4Q96JB6 756 aa5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 C8orf37Q96NL8 207 aa5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 SLC9A7Q96T83 725 aa5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 ROBO2Q9HCK4 1378 aa5.67□□□□□ -1.5
SNRNP27-204ENST00000487029 H0Y8X5 98 aa5.66□□□□□ -1.5
SNRNP27-204ENST00000487029 FGF10O15520 208 aaPredicted RBP5.66□□□□□ -1.5
SNRNP27-204ENST00000487029 SLPIP03973 132 aa5.66□□□□□ -1.5
SNRNP27-204ENST00000487029 PMLP29590 882 aa5.66□□□□□ -1.5
SNRNP27-204ENST00000487029 PWP1Q13610 501 aa5.66□□□□□ -1.5
SNRNP27-204ENST00000487029 GK5Q6ZS86 529 aa5.66□□□□□ -1.5
SNRNP27-204ENST00000487029 DSCC1Q9BVC3 393 aa5.66□□□□□ -1.5
SNRNP27-204ENST00000487029 TGIF2Q9GZN2 237 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms