RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 JAMLQ86YT9 394 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 IGDCC3Q8IVU1 814 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 DRC1Q96MC2 740 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 KRTAP4-2Q9BYR5 136 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 GP6Q9HCN6 339 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 EPB41L4AQ9HCS5 686 aaPredicted RBP7.12□□□□□ -1.27
SMC4-218ENST00000486711 FHOD1Q9Y613 1164 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 A0A0G2JLL6 359 aaPredicted RBP7.11□□□□□ -1.27
SMC4-218ENST00000486711 IGSF3O75054 1194 aa7.11□□□□□ -1.27
SMC4-218ENST00000486711 BUD31P41223 144 aaPredicted RBP7.11□□□□□ -1.27
SMC4-218ENST00000486711 ZNF445P59923 1031 aa7.11□□□□□ -1.27
SMC4-218ENST00000486711 PLEKHN1Q494U1 663 aaPredicted RBP7.11□□□□□ -1.27
SMC4-218ENST00000486711 AXDND1Q5T1B0 1012 aaPredicted RBP7.11□□□□□ -1.27
SMC4-218ENST00000486711 FAM129CQ86XR2 697 aa7.11□□□□□ -1.27
SMC4-218ENST00000486711 VPS37DQ86XT2 251 aa7.11□□□□□ -1.27
SMC4-218ENST00000486711 TMEFF1Q8IYR6 380 aa7.11□□□□□ -1.27
SMC4-218ENST00000486711 KRTAP17-1Q9BYP8 105 aa7.11□□□□□ -1.27
SMC4-218ENST00000486711 SF3B6Q9Y3B4 125 aaKnown RBP7.11□□□□□ -1.27
SMC4-218ENST00000486711 PCDHA5Q9Y5H7 936 aa7.11□□□□□ -1.27
SMC4-218ENST00000486711 FGF10O15520 208 aaPredicted RBP7.1□□□□□ -1.27
SMC4-218ENST00000486711 ITGA4P13612 1032 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 CD247P20963 164 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 MAPKAPK2P49137 400 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 MVKQ03426 396 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 NFIXQ14938 502 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 ZC3H14Q6PJT7 736 aaKnown RBP7.1□□□□□ -1.27
SMC4-218ENST00000486711 UNC5AQ6ZN44 842 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 SP8Q8IXZ3 490 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 FIBCD1Q8N539 461 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 SLC43A3Q8NBI5 491 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 BRF1Q92994 677 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 TINF2Q9BSI4 451 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 RTEL1Q9NZ71 1219 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 PPP1R1BQ9UD71 204 aaPredicted RBP7.1□□□□□ -1.27
SMC4-218ENST00000486711 PPT2Q9UMR5 302 aa7.1□□□□□ -1.27
SMC4-218ENST00000486711 A0A1W2PQJ5 194 aa7.09□□□□□ -1.27
SMC4-218ENST00000486711 TP53P04637 393 aaPredicted RBP7.09□□□□□ -1.27
SMC4-218ENST00000486711 COL9A2Q14055 689 aaPredicted RBP7.09□□□□□ -1.27
SMC4-218ENST00000486711 ZYXQ15942 572 aaKnown RBP7.09□□□□□ -1.27
SMC4-218ENST00000486711 LSRQ86X29 649 aaPredicted RBP7.09□□□□□ -1.27
SMC4-218ENST00000486711 TANGO6Q9C0B7 1094 aa7.09□□□□□ -1.27
SMC4-218ENST00000486711 SRGAP3O43295 1099 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 BUB1BO60566 1050 aaPredicted RBP7.08□□□□□ -1.28
SMC4-218ENST00000486711 CYBBP04839 570 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 MSL3P1P0C860 447 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 PFKLP17858 780 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 DNAJA1P31689 397 aaKnown RBP7.08□□□□□ -1.28
SMC4-218ENST00000486711 CORO7P57737 925 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 POU4F1Q01851 419 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 TCEAL1Q15170 157 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 PAQR3Q6TCH7 311 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 RUFY4Q6ZNE9 571 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 XYLT2Q9H1B5 865 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 NOL6Q9H6R4 1146 aaKnown RBP7.08□□□□□ -1.28
SMC4-218ENST00000486711 FAM86C1Q9NVL1 165 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 ZNF214Q9UL59 606 aaPredicted RBP7.08□□□□□ -1.28
SMC4-218ENST00000486711 ZNF451Q9Y4E5 1061 aa7.08□□□□□ -1.28
SMC4-218ENST00000486711 A0A087WZG4 1122 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 FOXD2O60548 495 aaPredicted RBP7.07□□□□□ -1.28
SMC4-218ENST00000486711 TBC1D8O95759 1140 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 CD3EP07766 207 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 DBHP09172 617 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 SYN1P17600 705 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 NCKAP1LP55160 1127 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 ZNF200P98182 395 aaPredicted RBP7.07□□□□□ -1.28
SMC4-218ENST00000486711 ARID5AQ03989 594 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 PAK2Q13177 524 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 GPRASP2Q96D09 838 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 SPATA32Q96LK8 384 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 PWWP2AQ96N64 755 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 PTCHD1Q96NR3 888 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 FCRL3Q96P31 734 aaPredicted RBP7.07□□□□□ -1.28
SMC4-218ENST00000486711 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 KRTAP4-11Q9BYQ6 195 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 PDLIM7Q9NR12 457 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 SLC12A7Q9Y666 1083 aa7.07□□□□□ -1.28
SMC4-218ENST00000486711 IRS2Q9Y4H2 1338 aa7.06□□□□□ -1.28
SMC4-218ENST00000486711 ATP2B1P20020 1258 aa7.06□□□□□ -1.28
SMC4-218ENST00000486711 CAP1Q01518 475 aa7.06□□□□□ -1.28
SMC4-218ENST00000486711 TARBP2Q15633 366 aaKnown RBP7.06□□□□□ -1.28
SMC4-218ENST00000486711 VMACQ2NL98 169 aa7.06□□□□□ -1.28
SMC4-218ENST00000486711 BICRALQ6AI39 1079 aa7.06□□□□□ -1.28
SMC4-218ENST00000486711 NLGN1Q8N2Q7 840 aa7.06□□□□□ -1.28
SMC4-218ENST00000486711 LINC01356Q8N9X3 169 aa7.06□□□□□ -1.28
SMC4-218ENST00000486711 UBXN4Q92575 508 aa7.06□□□□□ -1.28
SMC4-218ENST00000486711 ZDHHC15Q96MV8 337 aa7.06□□□□□ -1.28
SMC4-218ENST00000486711 LUC7LQ9NQ29 371 aaKnown RBP7.06□□□□□ -1.28
SMC4-218ENST00000486711 DIS3Q9Y2L1 958 aaKnown RBP7.06□□□□□ -1.28
SMC4-218ENST00000486711 OTOL1A6NHN0 477 aaPredicted RBP7.05□□□□□ -1.28
SMC4-218ENST00000486711 IFNGR1P15260 489 aa7.05□□□□□ -1.28
SMC4-218ENST00000486711 IGFBP6P24592 240 aaPredicted RBP7.05□□□□□ -1.28
SMC4-218ENST00000486711 GJA8P48165 433 aa7.05□□□□□ -1.28
SMC4-218ENST00000486711 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
SMC4-218ENST00000486711 CXorf38Q8TB03 319 aa7.05□□□□□ -1.28
SMC4-218ENST00000486711 WHRNQ9P202 907 aa7.05□□□□□ -1.28
SMC4-218ENST00000486711 CBFA2T2O43439 604 aa7.04□□□□□ -1.28
SMC4-218ENST00000486711 L1CAMP32004 1257 aa7.04□□□□□ -1.28
SMC4-218ENST00000486711 ERICH6BQ5W0A0 696 aa7.04□□□□□ -1.28
SMC4-218ENST00000486711 CCDC81Q6ZN84 652 aa7.04□□□□□ -1.28
SMC4-218ENST00000486711 NLGN2Q8NFZ4 835 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms