RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 BICD2Q8TD16 824 aa10.38□□□□□ -0.75
COL12A1-208ENST00000486533 TRIB2Q92519 343 aa10.38□□□□□ -0.75
COL12A1-208ENST00000486533 APPBP2Q92624 585 aa10.38□□□□□ -0.75
COL12A1-208ENST00000486533 CCDC17Q96LX7 622 aa10.38□□□□□ -0.75
COL12A1-208ENST00000486533 HTATIP2Q9BUP3 242 aa10.38□□□□□ -0.75
COL12A1-208ENST00000486533 DSCC1Q9BVC3 393 aa10.38□□□□□ -0.75
COL12A1-208ENST00000486533 CLSTN2Q9H4D0 955 aa10.38□□□□□ -0.75
COL12A1-208ENST00000486533 SH2D4AQ9H788 454 aa10.38□□□□□ -0.75
COL12A1-208ENST00000486533 HMX1Q9NP08 348 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-208ENST00000486533 ARPP21Q9UBL0 812 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-208ENST00000486533 RPTORQ8N122 1335 aa10.38□□□□□ -0.75
COL12A1-208ENST00000486533 SPDYE16A6NNV3 312 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-208ENST00000486533 H0YGN5 161 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 RNF113AO15541 343 aaKnown RBP10.37□□□□□ -0.75
COL12A1-208ENST00000486533 CNMDO75829 334 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 ZFYP08048 801 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-208ENST00000486533 XRCC5P13010 732 aaKnown RBP10.37□□□□□ -0.75
COL12A1-208ENST00000486533 RGS2P41220 211 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 TYRO3Q06418 890 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 UBE2Q1Q7Z7E8 422 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 SPICE1Q8N0Z3 855 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 STK11IPQ8N1F8 1099 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 OSBP2Q969R2 916 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 CHAMP1Q96JM3 812 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 STRBPQ96SI9 672 aaKnown RBP10.37□□□□□ -0.75
COL12A1-208ENST00000486533 CTNNA3Q9UI47 895 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 IVNS1ABPQ9Y6Y0 642 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 LAMA4Q16363 1823 aa10.37□□□□□ -0.75
COL12A1-208ENST00000486533 MINDY4BA8MYZ0 360 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 GOLGA6L19H0YKK7 550 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 GPAA1O43292 621 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 RAD21O60216 631 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 DHX16O60231 1041 aaKnown RBP10.36□□□□□ -0.75
COL12A1-208ENST00000486533 APPP05067 770 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 CDC25BP30305 580 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 GTF2F1P35269 517 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL12A1-208ENST00000486533 TDO2P48775 406 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 TOB2Q14106 344 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-208ENST00000486533 COG2Q14746 738 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 MORN1Q5T089 497 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 GIMAP6Q6P9H5 292 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 LBX2Q6XYB7 198 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 CCDC73Q6ZRK6 1079 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 RBM43Q6ZSC3 357 aaKnown RBP10.36□□□□□ -0.75
COL12A1-208ENST00000486533 TRMT44Q8IYL2 757 aaKnown RBP10.36□□□□□ -0.75
COL12A1-208ENST00000486533 NECAB1Q8N987 351 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 LEO1Q8WVC0 666 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-208ENST00000486533 LPAR1Q92633 364 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 APBA2Q99767 749 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 HOXC10Q9NYD6 342 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 BTBD7Q9P203 1132 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 TMX2Q9Y320 296 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 DNAH12Q6ZR08 3092 aa10.36□□□□□ -0.75
COL12A1-208ENST00000486533 GSG1L2A8MUP6 293 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 PFKFB2O60825 505 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 FLOT1O75955 427 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 NUDT7P0C024 238 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 EEF2P13639 858 aaKnown RBP10.35□□□□□ -0.75
COL12A1-208ENST00000486533 CPA1P15085 419 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 CAPN2P17655 700 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 CCL14Q16627 93 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 KIAA1755Q5JYT7 1200 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 SIAH1Q8IUQ4 282 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 USP6NLQ92738 828 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 NAT10Q9H0A0 1025 aaKnown RBP10.35□□□□□ -0.75
COL12A1-208ENST00000486533 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 VCPKMTQ9H867 229 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 KANSL2Q9H9L4 492 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 MKNK2Q9HBH9 465 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 TRIOBPQ9H2D6 2365 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 M0R2C6 588 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 NRDCO43847 1150 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 GNAT2P19087 354 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 TPM4P67936 248 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 MAP2K5Q13163 448 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 PLS1Q14651 629 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 STX1AQ16623 288 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 HABP4Q5JVS0 413 aaKnown RBP10.35□□□□□ -0.75
COL12A1-208ENST00000486533 Q6ZUG5 572 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 DHX32Q7L7V1 743 aaKnown RBP10.35□□□□□ -0.75
COL12A1-208ENST00000486533 DRC7Q8IY82 874 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 PAWRQ96IZ0 340 aaKnown RBP10.35□□□□□ -0.75
COL12A1-208ENST00000486533 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
COL12A1-208ENST00000486533 GPHNQ9NQX3 736 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-208ENST00000486533 RLFQ13129 1914 aa10.34□□□□□ -0.75
COL12A1-208ENST00000486533 A0A0G2JMZ2 1700 aa10.34□□□□□ -0.75
COL12A1-208ENST00000486533 SLC15A5A6NIM6 579 aa10.34□□□□□ -0.75
COL12A1-208ENST00000486533 WDR46O15213 610 aaKnown RBP10.34□□□□□ -0.75
COL12A1-208ENST00000486533 EVI5O60447 810 aa10.34□□□□□ -0.75
COL12A1-208ENST00000486533 KINO60870 393 aaKnown RBP10.34□□□□□ -0.75
COL12A1-208ENST00000486533 RASA1P20936 1047 aa10.34□□□□□ -0.75
COL12A1-208ENST00000486533 PTPREP23469 700 aa10.34□□□□□ -0.75
COL12A1-208ENST00000486533 FOXK1P85037 733 aa10.34□□□□□ -0.75
COL12A1-208ENST00000486533 CACNB2Q08289 660 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-208ENST00000486533 ST3GAL1Q11201 340 aa10.34□□□□□ -0.75
COL12A1-208ENST00000486533 RESTQ13127 1097 aa10.34□□□□□ -0.75
COL12A1-208ENST00000486533 ZRSR1Q15695 479 aaKnown RBP10.34□□□□□ -0.75
COL12A1-208ENST00000486533 SBK1Q52WX2 424 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms