RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 XDHP47989 1333 aa8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 ZNF609O15014 1411 aa8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 FKTNO75072 461 aa8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 SASH1O94885 1247 aa8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 DUSP27Q5VZP5 1158 aa8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 ANKRD18AQ8IVF6 992 aa8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 PHAXQ9H814 394 aaKnown RBP8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 ABI2Q9NYB9 513 aaPredicted RBP8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 CXXC1Q9P0U4 656 aaPredicted RBP8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.3□□□□□ -1.08
TMEM39A-209ENST00000486235 WNT10BO00744 389 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 PDE8AO60658 829 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 HOXB7P09629 217 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 ATP2B4P23634 1241 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 NF2P35240 595 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 TM4SF4P48230 202 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 PTPN12Q05209 780 aaKnown RBP8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 SREBF2Q12772 1141 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 RNF43Q68DV7 783 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 CEP120Q8N960 986 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 KLHL23Q8NBE8 558 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 MYRFLQ96LU7 910 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 KCNF1Q9H3M0 494 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 STIM2Q9P246 746 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 FZD1Q9UP38 647 aa8.29□□□□□ -1.08
TMEM39A-209ENST00000486235 ELL2O00472 640 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 SART1O43290 800 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 KIF4AO95239 1232 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 PCCAP05165 728 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 HSP90B1P14625 803 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 ACPPP15309 386 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 PTPRAP18433 802 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 TXKP42681 527 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 DACT2Q5SW24 774 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 ARMC9Q7Z3E5 817 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 CCDC191Q8NCU4 936 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 COL26A1Q96A83 441 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 CWC25Q9NXE8 425 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 TMEM63CQ9P1W3 806 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 ANGEL1Q9UNK9 670 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 TRIM17Q9Y577 477 aa8.28□□□□□ -1.08
TMEM39A-209ENST00000486235 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 PRR19A6NJB7 356 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 BMP3P12645 472 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 GRIK1P39086 918 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 NLRP12P59046 1061 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 UVSSAQ2YD98 709 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 NOM1Q5C9Z4 860 aaKnown RBP8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 HABP4Q5JVS0 413 aaKnown RBP8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 ATCAYQ86WG3 371 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 KIAA0825Q8IV33 1275 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 FAM20CQ8IXL6 584 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 RUNDC1Q96C34 613 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 GCC1Q96CN9 775 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 CDC5LQ99459 802 aaKnown RBP8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 DBNDD2Q9BQY9 259 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 TRAIPQ9BWF2 469 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 ELP3Q9H9T3 547 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 CNTN3Q9P232 1028 aa8.27□□□□□ -1.09
TMEM39A-209ENST00000486235 KIAA0100Q14667 2235 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 MED23Q9ULK4 1368 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 KLRK1P26718 216 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 PREPP48147 710 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 CCT4P50991 539 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 CTSWP56202 376 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 ELOAQ14241 798 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 STRIP1Q5VSL9 837 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 BEND4Q6ZU67 534 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 OTOP1Q7RTM1 612 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 APOBEC3FQ8IUX4 373 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 SHKBP1Q8TBC3 707 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 SLC7A3Q8WY07 619 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 METTL22Q9BUU2 404 aaPredicted RBP8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 GREM2Q9H772 168 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 MINPP1Q9UNW1 487 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 PSME4Q14997 1843 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 MYO3BQ8WXR4 1341 aa8.26□□□□□ -1.09
TMEM39A-209ENST00000486235 IGF2BP3O00425 579 aaKnown RBP eCLIP8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 SPINK2P20155 84 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 WDR43Q15061 677 aaKnown RBP eCLIP8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 RALBP1Q15311 655 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 LDLRAD1Q5T700 205 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 TMEM164Q5U3C3 297 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 TTLL5Q6EMB2 1281 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 ZNF438Q7Z4V0 828 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 CLEC10AQ8IUN9 316 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 WNK4Q96J92 1243 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 CLMNQ96JQ2 1002 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 FAM83CQ9BQN1 747 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 COA1Q9GZY4 146 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 ADAM19Q9H013 955 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 BSDC1Q9NW68 430 aaPredicted RBP8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 MAP3K2Q9Y2U5 619 aa8.25□□□□□ -1.09
TMEM39A-209ENST00000486235 MANSC4A6NHS7 340 aaPredicted RBP8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 WDR64B1ANS9 1081 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 DDX58O95786 925 aaKnown RBP8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 EN2P19622 333 aaPredicted RBP8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 HGSNATQ68CP4 663 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms