RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 BAG3O95817 575 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 KCNA5P22460 613 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 ARID4AP29374 1257 aaPredicted RBP10.13□□□□□ -0.79
XRN1-212ENST00000486211 SHMT1P34896 483 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 MCAMP43121 646 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 SEPT2Q15019 361 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 CERKLQ49MI3 558 aaPredicted RBP10.13□□□□□ -0.79
XRN1-212ENST00000486211 GNASQ5JWF2 1037 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 MAMDC4Q6UXC1 1216 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 RIOX2Q8IUF8 465 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 MSL3Q8N5Y2 521 aaKnown RBP10.13□□□□□ -0.79
XRN1-212ENST00000486211 GDPD5Q8WTR4 605 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 SLC9A7Q96T83 725 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 NOL10Q9BSC4 688 aaKnown RBP10.13□□□□□ -0.79
XRN1-212ENST00000486211 TRPV6Q9H1D0 765 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 ALG13Q9NP73 1137 aaKnown RBP10.13□□□□□ -0.79
XRN1-212ENST00000486211 COPRSQ9NQ92 184 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 SERPINB13Q9UIV8 391 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 ZHX1Q9UKY1 873 aaPredicted RBP10.13□□□□□ -0.79
XRN1-212ENST00000486211 ADAMTS5Q9UNA0 930 aa10.13□□□□□ -0.79
XRN1-212ENST00000486211 MYH1P12882 1939 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 B4GALT4O60513 344 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 FLOT1O75955 427 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 PFKMP08237 780 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 ZP2Q05996 745 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 KCTD2Q14681 263 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 NAA16Q6N069 864 aaPredicted RBP10.12□□□□□ -0.79
XRN1-212ENST00000486211 HERC6Q8IVU3 1022 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 PHOSPHO2Q8TCD6 241 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 NEK9Q8TD19 979 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 TATDN2Q93075 761 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 LRP2BPQ9P2M1 347 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 TECTAO75443 2155 aa10.12□□□□□ -0.79
XRN1-212ENST00000486211 PTPRSQ13332 1948 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 ASTN1O14525 1302 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 ZNF536O15090 1300 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 SCN5AQ14524 2016 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 DNAJC25-GNG10A0A024R161 153 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 LCHNA4D1U4 455 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 DYNLL1P63167 89 aaKnown RBP10.11□□□□□ -0.79
XRN1-212ENST00000486211 BEX3Q00994 111 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 TFCP2Q12800 502 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 ITGA7Q13683 1181 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 ACVR2BQ13705 512 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 CCDC144BQ3MJ40 725 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 CXCL17Q6UXB2 119 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 WDR63Q8IWG1 891 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 PRKRIP1Q9H875 184 aaPredicted RBP10.11□□□□□ -0.79
XRN1-212ENST00000486211 CABP5Q9NP86 173 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 C5orf42Q9H799 3197 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 DCHS1Q96JQ0 3298 aa10.11□□□□□ -0.79
XRN1-212ENST00000486211 ZFHX2Q9C0A1 2572 aaPredicted RBP10.1□□□□□ -0.79
XRN1-212ENST00000486211 GABPAQ06546 454 aa10.1□□□□□ -0.79
XRN1-212ENST00000486211 PUS10Q3MIT2 529 aaKnown RBP10.1□□□□□ -0.79
XRN1-212ENST00000486211 ERMP1Q7Z2K6 904 aa10.1□□□□□ -0.79
XRN1-212ENST00000486211 DEFB128Q7Z7B8 93 aa10.1□□□□□ -0.79
XRN1-212ENST00000486211 REPS2Q8NFH8 660 aa10.1□□□□□ -0.79
XRN1-212ENST00000486211 FGD4Q96M96 766 aa10.1□□□□□ -0.79
XRN1-212ENST00000486211 KATNBL1Q9H079 304 aa10.1□□□□□ -0.79
XRN1-212ENST00000486211 SUGCTQ9HAC7 445 aa10.1□□□□□ -0.79
XRN1-212ENST00000486211 SPC25Q9HBM1 224 aa10.1□□□□□ -0.79
XRN1-212ENST00000486211 ZNF214Q9UL59 606 aaPredicted RBP10.1□□□□□ -0.79
XRN1-212ENST00000486211 AKAP2Q9Y2D5 859 aa10.1□□□□□ -0.79
XRN1-212ENST00000486211 PLXNA3P51805 1871 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 KMT2EQ8IZD2 1858 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 CABYRO75952 493 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 IRS1P35568 1242 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 STAT3P40763 770 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 PLCD1P51178 756 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 HERC4Q5GLZ8 1057 aaPredicted RBP10.09□□□□□ -0.79
XRN1-212ENST00000486211 Q6ZNB5 142 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 BMP8AQ7Z5Y6 402 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 SIAH1Q8IUQ4 282 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 FBXO28Q9NVF7 368 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 FAM86C1Q9NVL1 165 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 PRKAG3Q9UGI9 489 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 TRIOO75962 3097 aa10.09□□□□□ -0.79
XRN1-212ENST00000486211 PTPRCP08575 1304 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 MYO5AQ9Y4I1 1855 aaKnown RBP10.08□□□□□ -0.8
XRN1-212ENST00000486211 MCM3APO60318 1980 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 KIF28PB7ZC32 967 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 H3BQ06 376 aaPredicted RBP10.08□□□□□ -0.8
XRN1-212ENST00000486211 VWA5AO00534 786 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 ACTN1P12814 892 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 PLCB2Q00722 1185 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 ADHFE1Q8IWW8 467 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 SPICE1Q8N0Z3 855 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 KCNV2Q8TDN2 545 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 NEUROD6Q96NK8 337 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 PRRX2Q99811 253 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 SEZ6LQ9BYH1 1024 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 ABHD16BQ9H3Z7 469 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 MUTYHQ9UIF7 546 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 CACNA1HO95180 2353 aa10.08□□□□□ -0.8
XRN1-212ENST00000486211 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.07□□□□□ -0.8
XRN1-212ENST00000486211 C3orf80F5H4A9 247 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 WDR46O15213 610 aaKnown RBP10.07□□□□□ -0.8
XRN1-212ENST00000486211 CYP2E1P05181 493 aaPredicted RBP10.07□□□□□ -0.8
XRN1-212ENST00000486211 UBTFL1P0CB47 393 aaPredicted RBP10.07□□□□□ -0.8
XRN1-212ENST00000486211 CYP2C9P11712 490 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms