RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 TTLL1O95922 423 aa23■■□□□ 1.27
CHRD-216ENST00000486066 BMP3P12645 472 aa23■■□□□ 1.27
CHRD-216ENST00000486066 MYOGP15173 224 aa23■■□□□ 1.27
CHRD-216ENST00000486066 SLC4A3P48751 1232 aa23■■□□□ 1.27
CHRD-216ENST00000486066 RABGGTBP53611 331 aa23■■□□□ 1.27
CHRD-216ENST00000486066 STK11IPQ8N1F8 1099 aa23■■□□□ 1.27
CHRD-216ENST00000486066 KBTBD3Q8NAB2 608 aa23■■□□□ 1.27
CHRD-216ENST00000486066 MORC4Q8TE76 937 aa23■■□□□ 1.27
CHRD-216ENST00000486066 DDX19BQ9UMR2 479 aa23■■□□□ 1.27
CHRD-216ENST00000486066 Q9Y3F1 56 aa23■■□□□ 1.27
CHRD-216ENST00000486066 DDX49Q9Y6V7 483 aaKnown RBP23■■□□□ 1.27
CHRD-216ENST00000486066 TANC1Q9C0D5 1861 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 ASB14A6NK59 587 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 MINDY4BA8MYZ0 360 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 PLA2G6O60733 806 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 PRDM1O75626 825 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 CCL23P55773 120 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 SLFN13Q68D06 897 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 NEDD1Q8NHV4 660 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 APPBP2Q92624 585 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 GMCL1Q96IK5 515 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 NECAB3Q96P71 396 aaPredicted RBP22.99■■□□□ 1.27
CHRD-216ENST00000486066 PDGFCQ9NRA1 345 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 HOMER2Q9NSB8 354 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 RNF146Q9NTX7 359 aa22.99■■□□□ 1.27
CHRD-216ENST00000486066 TKFCQ3LXA3 575 aa22.98■■□□□ 1.27
CHRD-216ENST00000486066 BRWD1Q9NSI6 2320 aa22.97■■□□□ 1.27
CHRD-216ENST00000486066 GPAA1O43292 621 aa22.97■■□□□ 1.27
CHRD-216ENST00000486066 STAT2P52630 851 aa22.97■■□□□ 1.27
CHRD-216ENST00000486066 HNRNPUQ00839 825 aaKnown RBP eCLIP22.97■■□□□ 1.27
CHRD-216ENST00000486066 TFF2Q03403 129 aa22.97■■□□□ 1.27
CHRD-216ENST00000486066 PPP2R2DQ66LE6 453 aa22.97■■□□□ 1.27
CHRD-216ENST00000486066 ALDH8A1Q9H2A2 487 aaPredicted RBP22.97■■□□□ 1.27
CHRD-216ENST00000486066 COG6Q9Y2V7 657 aa22.97■■□□□ 1.27
CHRD-216ENST00000486066 CTDP1Q9Y5B0 961 aaPredicted RBP22.97■■□□□ 1.27
CHRD-216ENST00000486066 SLC4A7Q9Y6M7 1214 aa22.97■■□□□ 1.27
CHRD-216ENST00000486066 PTPRSQ13332 1948 aa22.97■■□□□ 1.27
CHRD-216ENST00000486066 TET1Q8NFU7 2136 aa22.97■■□□□ 1.27
CHRD-216ENST00000486066 TMEM232C9JQI7 657 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 ERC2O15083 957 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 DYNC1LI2O43237 492 aaPredicted RBP22.96■■□□□ 1.27
CHRD-216ENST00000486066 MS4A1P11836 297 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 PSMC6P62333 389 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 IQSEC1Q6DN90 963 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 RPUSD2Q8IZ73 545 aaKnown RBP22.96■■□□□ 1.27
CHRD-216ENST00000486066 ZNF444Q8N0Y2 327 aaPredicted RBP22.96■■□□□ 1.27
CHRD-216ENST00000486066 STAG1Q8WVM7 1258 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 SCLYQ96I15 445 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 LRRCC1Q9C099 1032 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 ECHDC1Q9NTX5 307 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 CYP39A1Q9NYL5 469 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 MTCH2Q9Y6C9 303 aa22.96■■□□□ 1.27
CHRD-216ENST00000486066 M0R2C6 588 aa22.95■■□□□ 1.26
CHRD-216ENST00000486066 TTLL4Q14679 1199 aa22.95■■□□□ 1.26
CHRD-216ENST00000486066 FAM160B2Q86V87 743 aa22.95■■□□□ 1.26
CHRD-216ENST00000486066 FBXO16Q8IX29 292 aaPredicted RBP22.95■■□□□ 1.26
CHRD-216ENST00000486066 TRERF1Q96PN7 1200 aa22.95■■□□□ 1.26
CHRD-216ENST00000486066 BCL11AQ9H165 835 aa22.95■■□□□ 1.26
CHRD-216ENST00000486066 ZNF287Q9HBT7 754 aa22.95■■□□□ 1.26
CHRD-216ENST00000486066 RNF113AO15541 343 aaKnown RBP22.94■■□□□ 1.26
CHRD-216ENST00000486066 SMARCA5O60264 1052 aaPredicted RBP22.94■■□□□ 1.26
CHRD-216ENST00000486066 PFKMP08237 780 aa22.94■■□□□ 1.26
CHRD-216ENST00000486066 GNAT2P19087 354 aa22.94■■□□□ 1.26
CHRD-216ENST00000486066 MUM1L1Q5H9M0 696 aa22.94■■□□□ 1.26
CHRD-216ENST00000486066 IFNL3Q8IZI9 196 aa22.94■■□□□ 1.26
CHRD-216ENST00000486066 AP5M1Q9H0R1 490 aa22.94■■□□□ 1.26
CHRD-216ENST00000486066 EPOPA6NHQ4 379 aa22.93■■□□□ 1.26
CHRD-216ENST00000486066 PATL2C9JE40 543 aaKnown RBP22.93■■□□□ 1.26
CHRD-216ENST00000486066 ZEB2O60315 1214 aa22.93■■□□□ 1.26
CHRD-216ENST00000486066 ATP2A2P16615 1042 aaKnown RBP22.93■■□□□ 1.26
CHRD-216ENST00000486066 HOXD11P31277 338 aaPredicted RBP22.93■■□□□ 1.26
CHRD-216ENST00000486066 NOVP48745 357 aa22.93■■□□□ 1.26
CHRD-216ENST00000486066 KCNQ1P51787 676 aa22.93■■□□□ 1.26
CHRD-216ENST00000486066 NOL8Q76FK4 1167 aaKnown RBP22.93■■□□□ 1.26
CHRD-216ENST00000486066 CHURC1Q8WUH1 139 aa22.93■■□□□ 1.26
CHRD-216ENST00000486066 VTA1Q9NP79 307 aa22.93■■□□□ 1.26
CHRD-216ENST00000486066 ZFYP08048 801 aaPredicted RBP22.92■■□□□ 1.26
CHRD-216ENST00000486066 DUSP28Q4G0W2 176 aa22.92■■□□□ 1.26
CHRD-216ENST00000486066 PURBQ96QR8 312 aaKnown RBP22.92■■□□□ 1.26
CHRD-216ENST00000486066 C1QTNF1Q9BXJ1 281 aa22.92■■□□□ 1.26
CHRD-216ENST00000486066 TSPYL2Q9H2G4 693 aaPredicted RBP22.92■■□□□ 1.26
CHRD-216ENST00000486066 TRMT13Q9NUP7 481 aaKnown RBP22.92■■□□□ 1.26
CHRD-216ENST00000486066 ARIH1Q9Y4X5 557 aaPredicted RBP22.92■■□□□ 1.26
CHRD-216ENST00000486066 COL4A4P53420 1690 aaPredicted RBP22.91■■□□□ 1.26
CHRD-216ENST00000486066 RBM47A0AV96 593 aaKnown RBP22.91■■□□□ 1.26
CHRD-216ENST00000486066 ARHGEF15O94989 841 aa22.91■■□□□ 1.26
CHRD-216ENST00000486066 CA3P07451 260 aa22.91■■□□□ 1.26
CHRD-216ENST00000486066 TDO2P48775 406 aa22.91■■□□□ 1.26
CHRD-216ENST00000486066 PURAQ00577 322 aaKnown RBP22.91■■□□□ 1.26
CHRD-216ENST00000486066 RASGRP2Q7LDG7 609 aa22.91■■□□□ 1.26
CHRD-216ENST00000486066 PRR12Q9ULL5 1215 aa22.91■■□□□ 1.26
CHRD-216ENST00000486066 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.91■■□□□ 1.26
CHRD-216ENST00000486066 PIEZO1Q92508 2521 aa22.91■■□□□ 1.26
CHRD-216ENST00000486066 TNKSO95271 1327 aa22.9■■□□□ 1.26
CHRD-216ENST00000486066 RFXAPO00287 272 aa22.9■■□□□ 1.26
CHRD-216ENST00000486066 FOXP2O15409 715 aa22.9■■□□□ 1.26
CHRD-216ENST00000486066 TSPY3P0CV98 308 aa22.9■■□□□ 1.26
CHRD-216ENST00000486066 TSPY8P0CW00 308 aa22.9■■□□□ 1.26
CHRD-216ENST00000486066 CYP2C9P11712 490 aa22.9■■□□□ 1.26
CHRD-216ENST00000486066 ALAS1P13196 640 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms