RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
SND1-213ENST00000486037 TLK2Q86UE8 772 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 CCDC144CPQ8IYA2 1237 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 DDX11Q96FC9 970 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 NUP88Q99567 741 aaPredicted RBP11.83□□□□□ -0.52
SND1-213ENST00000486037 ALDH8A1Q9H2A2 487 aaPredicted RBP11.83□□□□□ -0.52
SND1-213ENST00000486037 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 SUGCTQ9HAC7 445 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 FPGT-TNNI3KV9GXZ4 949 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 ZNF536O15090 1300 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 ZFHX2Q9C0A1 2572 aaPredicted RBP11.82□□□□□ -0.52
SND1-213ENST00000486037 IGHDP01880 384 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 PFKMP08237 780 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 CNTN2Q02246 1040 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 TNFAIP2Q03169 654 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 ZP2Q05996 745 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 TCF15Q12870 199 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 FSCN1Q16658 493 aaKnown RBP11.82□□□□□ -0.52
SND1-213ENST00000486037 PHOSPHO2Q8TCD6 241 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 ARHGEF10LQ9HCE6 1279 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 FAM86C1Q9NVL1 165 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 MCM9Q9NXL9 1143 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 LMCD1Q9NZU5 365 aa11.82□□□□□ -0.52
SND1-213ENST00000486037 DYNC1LI2O43237 492 aaPredicted RBP11.81□□□□□ -0.52
SND1-213ENST00000486037 CABYRO75952 493 aa11.81□□□□□ -0.52
SND1-213ENST00000486037 EEF2P13639 858 aaKnown RBP11.81□□□□□ -0.52
SND1-213ENST00000486037 SMPD1P17405 629 aa11.81□□□□□ -0.52
SND1-213ENST00000486037 TCTN1Q2MV58 587 aa11.81□□□□□ -0.52
SND1-213ENST00000486037 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
SND1-213ENST00000486037 NOL8Q76FK4 1167 aaKnown RBP11.81□□□□□ -0.52
SND1-213ENST00000486037 NEK9Q8TD19 979 aa11.81□□□□□ -0.52
SND1-213ENST00000486037 SDR42E1Q8WUS8 393 aa11.81□□□□□ -0.52
SND1-213ENST00000486037 TEX13BQ9BXU2 312 aa11.81□□□□□ -0.52
SND1-213ENST00000486037 CHMP4BQ9H444 224 aaKnown RBP11.81□□□□□ -0.52
SND1-213ENST00000486037 ALG13Q9NP73 1137 aaKnown RBP11.81□□□□□ -0.52
SND1-213ENST00000486037 PDGFCQ9NRA1 345 aa11.81□□□□□ -0.52
SND1-213ENST00000486037 DBNLQ9UJU6 430 aaKnown RBP11.81□□□□□ -0.52
SND1-213ENST00000486037 TANC1Q9C0D5 1861 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 MYH8P13535 1937 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 ZFHX4Q86UP3 3567 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 C19orf67A6NJJ6 358 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 RAD21O60216 631 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 GFRA3O60609 400 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 IRS1P35568 1242 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 COPB2P35606 906 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 DEFB103AP81534 67 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 G3BP1Q13283 466 aaKnown RBP eCLIP11.8□□□□□ -0.522e-8■■■■□ 19.6
SND1-213ENST00000486037 CPXCR1Q8N123 301 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 ZNF512BQ96KM6 892 aaPredicted RBP11.8□□□□□ -0.52
SND1-213ENST00000486037 MUTYHQ9UIF7 546 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 TNKSO95271 1327 aa11.8□□□□□ -0.52
SND1-213ENST00000486037 SIP14410 1827 aa11.79□□□□□ -0.52
SND1-213ENST00000486037 CYP2D7A0A087X1C5 515 aa11.79□□□□□ -0.52
SND1-213ENST00000486037 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
SND1-213ENST00000486037 IQCF3P0C7M6 154 aa11.79□□□□□ -0.52
SND1-213ENST00000486037 ACTN1P12814 892 aa11.79□□□□□ -0.52
SND1-213ENST00000486037 WDR5P61964 334 aaKnown RBP11.79□□□□□ -0.52
SND1-213ENST00000486037 GPNMBQ14956 572 aa11.79□□□□□ -0.52
SND1-213ENST00000486037 CENPQQ7L2Z9 268 aaPredicted RBP11.79□□□□□ -0.52
SND1-213ENST00000486037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.79□□□□□ -0.52
SND1-213ENST00000486037 MFSD14AQ96MC6 490 aa11.79□□□□□ -0.52
SND1-213ENST00000486037 FTOQ9C0B1 505 aaKnown RBP eCLIP11.79□□□□□ -0.52
SND1-213ENST00000486037 SH2D4AQ9H788 454 aa11.79□□□□□ -0.52
SND1-213ENST00000486037 RAVER2Q9HCJ3 691 aaKnown RBP11.79□□□□□ -0.52
SND1-213ENST00000486037 DCP1AQ9NPI6 582 aaPredicted RBP11.79□□□□□ -0.52
SND1-213ENST00000486037 DNAH14Q0VDD8 3507 aa11.79□□□□□ -0.52
SND1-213ENST00000486037 CACNA1HO95180 2353 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 LINC01553A4QN01 128 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 SOWAHBA6NEL2 793 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 PTPN5P54829 565 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 ERVK-21P61565 698 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.78□□□□□ -0.524e-7■■■■■ 43.3
SND1-213ENST00000486037 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 ANKRD35Q8N283 1001 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 LCORLQ8N3X6 602 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 SLF1Q9BQI6 1058 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.78□□□□□ -0.52
SND1-213ENST00000486037 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
SND1-213ENST00000486037 GPR108Q9NPR9 543 aa11.78□□□□□ -0.52
SND1-213ENST00000486037 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.52
SND1-213ENST00000486037 MAGEB6P1A0A0J9YX57 407 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 PRKAB2O43741 272 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 GNAI3P08754 354 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 FOXK2Q01167 660 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 HDAC1Q13547 482 aaPredicted RBP11.77□□□□□ -0.53
SND1-213ENST00000486037 SLFNL1Q499Z3 407 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 TAPT1Q6NXT6 567 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 EEPD1Q7L9B9 569 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 CERS3Q8IU89 383 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 FBXO16Q8IX29 292 aaPredicted RBP11.77□□□□□ -0.53
SND1-213ENST00000486037 FAM133AQ8N9E0 248 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 TGS1Q96RS0 853 aaKnown RBP11.77□□□□□ -0.53
SND1-213ENST00000486037 C17orf80Q9BSJ5 609 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 AP5M1Q9H0R1 490 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 HDAC5Q9UQL6 1122 aa11.77□□□□□ -0.53
SND1-213ENST00000486037 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.53
SND1-213ENST00000486037 BAZ2AQ9UIF9 1905 aaKnown RBP11.77□□□□□ -0.53
SND1-213ENST00000486037 MYO7AQ13402 2215 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 PLXNA3P51805 1871 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 KMT2EQ8IZD2 1858 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms