RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 AS3MTQ9HBK9 375 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 ARHGEF10LQ9HCE6 1279 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 ATAD5Q96QE3 1844 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 DOCK1Q14185 1865 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 PHIPQ8WWQ0 1821 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 A0A1W2PRG0 241 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 TTLL8A6PVC2 850 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 SPTLC1O15269 473 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 EPB41L2O43491 1005 aaKnown RBP6.6□□□□□ -1.35
COPS3-208ENST00000486032 CCNYL3P0C7X3 344 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 HSPA8P11142 646 aaKnown RBP6.6□□□□□ -1.35
COPS3-208ENST00000486032 MCM5P33992 734 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 ANTXR2P58335 489 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 MTMR2Q13614 643 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 SART3Q15020 963 aaKnown RBP6.6□□□□□ -1.35
COPS3-208ENST00000486032 LDLRAD1Q5T700 205 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 IFIT1BQ5T764 474 aaKnown RBP6.6□□□□□ -1.35
COPS3-208ENST00000486032 COL13A1Q5TAT6 717 aaPredicted RBP6.6□□□□□ -1.35
COPS3-208ENST00000486032 Q6ZUG5 572 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 DHX32Q7L7V1 743 aaKnown RBP6.6□□□□□ -1.35
COPS3-208ENST00000486032 ERO1BQ86YB8 467 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 MB21D2Q8IYB1 491 aaPredicted RBP6.6□□□□□ -1.35
COPS3-208ENST00000486032 SPICE1Q8N0Z3 855 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 ZNF511Q8NB15 262 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 FAM174AQ8TBP5 190 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 KCNB2Q92953 911 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 WNK4Q96J92 1243 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 ZSCAN10Q96SZ4 725 aaPredicted RBP6.6□□□□□ -1.35
COPS3-208ENST00000486032 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.6□□□□□ -1.35
COPS3-208ENST00000486032 KAT14Q9H8E8 782 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 KANSL2Q9H9L4 492 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 IL17RBQ9NRM6 502 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 PDRG1Q9NUG6 133 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 CYP46A1Q9Y6A2 500 aa6.6□□□□□ -1.35
COPS3-208ENST00000486032 CCDC69A6NI79 296 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 SPDYE5A6NIY4 337 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 USP17L10C9JJH3 530 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 SH2B2O14492 632 aaPredicted RBP6.59□□□□□ -1.35
COPS3-208ENST00000486032 IRF6O14896 467 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 TTLL1O95922 423 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 HMGB1P09429 215 aaKnown RBP6.59□□□□□ -1.35
COPS3-208ENST00000486032 FGRP09769 529 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 RXRAP19793 462 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 RPS6KB1P23443 525 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 NEK4P51957 841 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 HMGCS2P54868 508 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 USP46P62068 366 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 PPATQ06203 517 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 NR5A1Q13285 461 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 CCDC96Q2M329 555 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 TSGA10IPQ3SY00 556 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 RUFY3Q7L099 469 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 CCDC144CPQ8IYA2 1237 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 ZNF280CQ8ND82 737 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 NUP133Q8WUM0 1156 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 BRF1Q92994 677 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 HLA-CQ95604 372 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 TBC1D32Q96NH3 1257 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 CDK15Q96Q40 435 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 TMEM47Q9BQJ4 181 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 TSEN34Q9BSV6 310 aaKnown RBP6.59□□□□□ -1.35
COPS3-208ENST00000486032 MYL10Q9BUA6 226 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 MTMR4Q9NYA4 1195 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 TMOD4Q9NZQ9 345 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 AFG3L2Q9Y4W6 797 aa6.59□□□□□ -1.35
COPS3-208ENST00000486032 FRMPD2Q68DX3 1309 aaPredicted RBP6.58□□□□□ -1.36
COPS3-208ENST00000486032 CCL15-CCL14A0A0B4J2E2 113 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 IGKV6D-41A0A0C4DH26 115 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 SLC35F4A4IF30 521 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 FIGNL2A6NMB9 653 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 IGF2BP3O00425 579 aaKnown RBP eCLIP6.58□□□□□ -1.36
COPS3-208ENST00000486032 RBM25P49756 843 aaKnown RBP6.58□□□□□ -1.36
COPS3-208ENST00000486032 LBX1P52954 281 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 BACE1P56817 501 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 ANAPC15P60006 121 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 EXOSC10Q01780 885 aaKnown RBP6.58□□□□□ -1.36
COPS3-208ENST00000486032 APOBRQ0VD83 1088 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 IKQ13123 557 aaPredicted RBP6.58□□□□□ -1.36
COPS3-208ENST00000486032 STK3Q13188 491 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 PPIL2Q13356 520 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 SNAPC2Q13487 334 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 ARID5BQ14865 1188 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 SEC23AQ15436 765 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 CCL15Q16663 113 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 CCDC178Q5BJE1 867 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 SLFN13Q68D06 897 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 USP17L2Q6R6M4 530 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 SYNE3Q6ZMZ3 975 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 RASGRP2Q7LDG7 609 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 SIAH1Q8IUQ4 282 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 ENAHQ8N8S7 591 aaPredicted RBP6.58□□□□□ -1.36
COPS3-208ENST00000486032 PNMA1Q8ND90 353 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 CCDC102AQ96A19 550 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 TMEM87BQ96K49 555 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 NUP88Q99567 741 aaPredicted RBP6.58□□□□□ -1.36
COPS3-208ENST00000486032 PTPN18Q99952 460 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 TM6SF1Q9BZW5 370 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 SH2D4AQ9H788 454 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 GOPCQ9HD26 462 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 GPCPD1Q9NPB8 672 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms