RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 TP53P04637 393 aaPredicted RBP7.01□□□□□ -1.29
GCFC2-209ENST00000486016 AFF3P51826 1226 aaKnown RBP7.01□□□□□ -1.29
GCFC2-209ENST00000486016 HLA-DQA1Q5Y7H0 255 aa7.01□□□□□ -1.29
GCFC2-209ENST00000486016 FIBCD1Q8N539 461 aa7.01□□□□□ -1.29
GCFC2-209ENST00000486016 GINM1Q9NU53 330 aa7.01□□□□□ -1.29
GCFC2-209ENST00000486016 CELA3BP08861 270 aa7□□□□□ -1.29
GCFC2-209ENST00000486016 FBLN1P23142 703 aa7□□□□□ -1.29
GCFC2-209ENST00000486016 SOX9P48436 509 aa7□□□□□ -1.29
GCFC2-209ENST00000486016 MAPKAPK2P49137 400 aa7□□□□□ -1.29
GCFC2-209ENST00000486016 TMEM62Q0P6H9 643 aa7□□□□□ -1.29
GCFC2-209ENST00000486016 COL9A2Q14055 689 aaPredicted RBP7□□□□□ -1.29
GCFC2-209ENST00000486016 PLEKHN1Q494U1 663 aaPredicted RBP7□□□□□ -1.29
GCFC2-209ENST00000486016 ERICH6BQ5W0A0 696 aa7□□□□□ -1.29
GCFC2-209ENST00000486016 CWF19L1Q69YN2 538 aaKnown RBP7□□□□□ -1.29
GCFC2-209ENST00000486016 NLGN2Q8NFZ4 835 aa7□□□□□ -1.29
GCFC2-209ENST00000486016 SRGAP3O43295 1099 aa6.99□□□□□ -1.29
GCFC2-209ENST00000486016 SASH1O94885 1247 aa6.99□□□□□ -1.29
GCFC2-209ENST00000486016 ADRB1P08588 477 aa6.99□□□□□ -1.29
GCFC2-209ENST00000486016 NOP2P46087 812 aaKnown RBP6.99□□□□□ -1.29
GCFC2-209ENST00000486016 PAK2Q13177 524 aa6.99□□□□□ -1.29
GCFC2-209ENST00000486016 NR1I3Q14994 352 aa6.99□□□□□ -1.29
GCFC2-209ENST00000486016 NOL9Q5SY16 702 aaKnown RBP6.99□□□□□ -1.29
GCFC2-209ENST00000486016 CNKSR3Q6P9H4 555 aa6.99□□□□□ -1.29
GCFC2-209ENST00000486016 CYP2R1Q6VVX0 501 aa6.99□□□□□ -1.29
GCFC2-209ENST00000486016 TP53I13Q8NBR0 393 aaPredicted RBP6.99□□□□□ -1.29
GCFC2-209ENST00000486016 RASGRP4Q8TDF6 673 aa6.99□□□□□ -1.29
GCFC2-209ENST00000486016 PTCHD1Q96NR3 888 aa6.99□□□□□ -1.29
GCFC2-209ENST00000486016 OTOL1A6NHN0 477 aaPredicted RBP6.98□□□□□ -1.29
GCFC2-209ENST00000486016 SCAMP3O14828 347 aaKnown RBP6.98□□□□□ -1.29
GCFC2-209ENST00000486016 DBHP09172 617 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 IFNGR1P15260 489 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 GIPRP48546 466 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 MFAP1P55081 439 aaKnown RBP6.98□□□□□ -1.29
GCFC2-209ENST00000486016 NCKAP1LP55160 1127 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 FBXW10Q5XX13 1052 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 CCDC81Q6ZN84 652 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 MCMBPQ9BTE3 642 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 KLHL25Q9H0H3 589 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 FAM86C1Q9NVL1 165 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 DIS3Q9Y2L1 958 aaKnown RBP6.98□□□□□ -1.29
GCFC2-209ENST00000486016 HCFC2Q9Y5Z7 792 aa6.98□□□□□ -1.29
GCFC2-209ENST00000486016 BUB1BO60566 1050 aaPredicted RBP6.97□□□□□ -1.29
GCFC2-209ENST00000486016 CYBBP04839 570 aa6.97□□□□□ -1.29
GCFC2-209ENST00000486016 ITGA4P13612 1032 aa6.97□□□□□ -1.29
GCFC2-209ENST00000486016 CORO7P57737 925 aa6.97□□□□□ -1.29
GCFC2-209ENST00000486016 CAP1Q01518 475 aa6.97□□□□□ -1.29
GCFC2-209ENST00000486016 PAQR3Q6TCH7 311 aa6.97□□□□□ -1.29
GCFC2-209ENST00000486016 ZNF654Q8IZM8 581 aa6.97□□□□□ -1.29
GCFC2-209ENST00000486016 NAT16Q8N8M0 369 aa6.97□□□□□ -1.29
GCFC2-209ENST00000486016 NOL6Q9H6R4 1146 aaKnown RBP6.97□□□□□ -1.29
GCFC2-209ENST00000486016 PDLIM7Q9NR12 457 aa6.97□□□□□ -1.29
GCFC2-209ENST00000486016 SF3B6Q9Y3B4 125 aaKnown RBP6.97□□□□□ -1.29
GCFC2-209ENST00000486016 VMACQ2NL98 169 aa6.96□□□□□ -1.3
GCFC2-209ENST00000486016 ZC3H14Q6PJT7 736 aaKnown RBP6.96□□□□□ -1.3
GCFC2-209ENST00000486016 C19orf47Q8N9M1 422 aaKnown RBP6.96□□□□□ -1.3
GCFC2-209ENST00000486016 HAUS7Q99871 368 aa6.96□□□□□ -1.3
GCFC2-209ENST00000486016 A0A1W2PQH9 124 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 CD3EP07766 207 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 ZNF200P98182 395 aaPredicted RBP6.95□□□□□ -1.3
GCFC2-209ENST00000486016 POU4F1Q01851 419 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 TCEAL1Q15170 157 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 RCSD1Q6JBY9 416 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 JAMLQ86YT9 394 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 LINC01356Q8N9X3 169 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 FEZF2Q8TBJ5 459 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 KLHL6Q8WZ60 621 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 SPATA32Q96LK8 384 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 ZDHHC15Q96MV8 337 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 PWWP2AQ96N64 755 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 WHRNQ9P202 907 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 SUSD2Q9UGT4 822 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 EFR3BQ9Y2G0 817 aa6.95□□□□□ -1.3
GCFC2-209ENST00000486016 FFAR3O14843 346 aa6.94□□□□□ -1.3
GCFC2-209ENST00000486016 AURKAO14965 403 aa6.94□□□□□ -1.3
GCFC2-209ENST00000486016 GJA8P48165 433 aa6.94□□□□□ -1.3
GCFC2-209ENST00000486016 ZDHHC14Q8IZN3 488 aa6.94□□□□□ -1.3
GCFC2-209ENST00000486016 ZNF513Q8N8E2 541 aaPredicted RBP6.94□□□□□ -1.3
GCFC2-209ENST00000486016 PHAXQ9H814 394 aaKnown RBP6.94□□□□□ -1.3
GCFC2-209ENST00000486016 LUC7LQ9NQ29 371 aaKnown RBP6.94□□□□□ -1.3
GCFC2-209ENST00000486016 FBLN5Q9UBX5 448 aa6.94□□□□□ -1.3
GCFC2-209ENST00000486016 PPP1R11O60927 126 aaPredicted RBP6.93□□□□□ -1.3
GCFC2-209ENST00000486016 TBC1D8O95759 1140 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 GLI4P10075 376 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 ATF2P15336 505 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 L1CAMP32004 1257 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 EIF6P56537 245 aaKnown RBP6.93□□□□□ -1.3
GCFC2-209ENST00000486016 ZXDCQ2QGD7 858 aaPredicted RBP6.93□□□□□ -1.3
GCFC2-209ENST00000486016 GNPTABQ3T906 1256 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 ARHGEF39Q8N4T4 335 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 SYT8Q8NBV8 401 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 GPRASP2Q96D09 838 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 SHDQ96IW2 340 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 PCDHB10Q9UN67 800 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 SLC12A7Q9Y666 1083 aa6.93□□□□□ -1.3
GCFC2-209ENST00000486016 A0A1W2PQ27 194 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 A0A1W2PQ64 194 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 A0A1W2PQC6 194 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 A0A1W2PQD8 194 aa6.92□□□□□ -1.3
GCFC2-209ENST00000486016 ZBTB7CA1YPR0 619 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms