RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 GANCQ8TET4 914 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 PKNOX2Q96KN3 472 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 VCX3AQ9NNX9 186 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 PCK1P35558 622 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 ADCY8P40145 1251 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 PTK2Q05397 1052 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 PHLDB2Q86SQ0 1253 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 FANCBQ8NB91 859 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 FAM71BQ8TC56 605 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 SDR42E1Q8WUS8 393 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 CDKL2Q92772 493 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 PSMB7Q99436 277 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 F8W8V4 182 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 HNRNPDLO14979 420 aaKnown RBP11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 SCG2P13521 617 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 PHKG2P15735 406 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 PDE6AP16499 860 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 NSFP46459 744 aaKnown RBP11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 ERBB4Q15303 1308 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 ODR4Q5SWX8 454 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 MAP3K21Q5TCX8 1036 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 PRAG1Q86YV5 1406 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 LMNTD2Q8IXW0 634 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 FAM149B1Q96BN6 582 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 HVCN1Q96D96 273 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 HDAC11Q96DB2 347 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 IMPACTQ9P2X3 320 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 DDAH1O94760 285 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 GOLGA8HP0CJ92 632 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 PNMA3Q9UL41 463 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 MAPKBP1O60336 1514 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 MGEA5O60502 916 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 NFKBIAP25963 317 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 BFSP1Q12934 665 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 ZBTB33Q86T24 672 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 SLF1Q9BQI6 1058 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 SERTAD1Q9UHV2 236 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 TNKSO95271 1327 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 RNF40O75150 1001 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 LRCH2Q5VUJ6 765 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 JADE1Q6IE81 842 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 CCDC170Q8IYT3 715 aa11.57□□□□□ -0.56
SRGAP3-207ENST00000485983 H7C0C1 242 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 HGSO14964 777 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 ATP5OP48047 213 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 EFCAB13Q8IY85 973 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 SAT1P21673 171 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 ANXA13P27216 316 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 HS1BP3Q53T59 392 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 GBP7Q8N8V2 638 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 PSPC1Q8WXF1 523 aaKnown RBP11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 ERO1AQ96HE7 468 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 CTTNBP2Q8WZ74 1663 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 ABCD1P33897 745 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 LONRF3Q496Y0 759 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 MAP3K15Q6ZN16 1313 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 RFC1P35251 1148 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 CRKLP46109 303 aaKnown RBP11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 KRT71Q3SY84 523 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 ASPRV1Q53RT3 343 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 C2orf69Q8N8R5 385 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 CCDC51Q96ER9 411 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 CARD14Q9BXL6 1004 aa11.56□□□□□ -0.56
SRGAP3-207ENST00000485983 M0R2C6 588 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 CCND2P30279 289 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 STX2P32856 288 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 ECE1P42892 770 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 IQCB1Q15051 598 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 RAB44Q7Z6P3 723 aaPredicted RBP11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 SPICE1Q8N0Z3 855 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 ZNF577Q9BSK1 485 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 UBN1Q9NPG3 1134 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 TYW1Q9NV66 732 aaKnown RBP11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 YEATS2Q9ULM3 1422 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 RASSF2P50749 326 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 ADAM9Q13443 819 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 TSNAXIP1Q2TAA8 658 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 FAM26FQ5R3K3 315 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 NOSTRINQ8IVI9 506 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 NLRP7Q8WX94 980 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 ATP6V1E2Q96A05 226 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 ZNF274Q96GC6 653 aaPredicted RBP11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 NT5C1BQ96P26 610 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 KANSL2Q9H9L4 492 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 MFAP3P55082 362 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 CYP4A11Q02928 519 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 BBOF1Q8ND07 529 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 WDR11Q9BZH6 1224 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 SOS2Q07890 1332 aaPredicted RBP11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 WDR64B1ANS9 1081 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 TXNDC9O14530 226 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 CIAPIN1Q6FI81 312 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 FAM173BQ6P4H8 233 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 OR8K1Q8NGG5 319 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 RIPOR2Q9Y4F9 1068 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 PCDHB4Q9Y5E5 795 aa11.55□□□□□ -0.56
SRGAP3-207ENST00000485983 MAD1L1Q9Y6D9 718 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms