RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 ZNFX1Q9P2E3 1918 aaKnown RBP19.82■□□□□ 0.76
VIM-205ENST00000485947 KBTBD13C9JR72 458 aa19.82■□□□□ 0.76
VIM-205ENST00000485947 K7ELQ4 463 aaPredicted RBP19.82■□□□□ 0.76
VIM-205ENST00000485947 RARBP10826 455 aa19.82■□□□□ 0.76
VIM-205ENST00000485947 ANKRD1Q15327 319 aa19.82■□□□□ 0.76
VIM-205ENST00000485947 RNF146Q9NTX7 359 aa19.82■□□□□ 0.76
VIM-205ENST00000485947 NEDD4P46934 1319 aa19.81■□□□□ 0.76
VIM-205ENST00000485947 LOC102724159A0A0B4J2E5 919 aa19.81■□□□□ 0.76
VIM-205ENST00000485947 KDM4AO75164 1064 aa19.81■□□□□ 0.76
VIM-205ENST00000485947 ZNF865P0CJ78 1059 aaPredicted RBP19.81■□□□□ 0.76
VIM-205ENST00000485947 ZNF543Q08ER8 600 aa19.81■□□□□ 0.76
VIM-205ENST00000485947 PWP2Q15269 919 aaKnown RBP19.81■□□□□ 0.76
VIM-205ENST00000485947 SYDE2Q5VT97 1194 aa19.81■□□□□ 0.76
VIM-205ENST00000485947 MB21D2Q8IYB1 491 aaPredicted RBP19.81■□□□□ 0.76
VIM-205ENST00000485947 FAM133AQ8N9E0 248 aa19.81■□□□□ 0.76
VIM-205ENST00000485947 TRERF1Q96PN7 1200 aa19.81■□□□□ 0.76
VIM-205ENST00000485947 ZSCAN10Q96SZ4 725 aaPredicted RBP19.81■□□□□ 0.76
VIM-205ENST00000485947 ABHD16BQ9H3Z7 469 aa19.81■□□□□ 0.76
VIM-205ENST00000485947 FAM184BQ9ULE4 1060 aa19.81■□□□□ 0.76
VIM-205ENST00000485947 ASB14A6NK59 587 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 POTEB2H3BUK9 544 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 CD2BP2O95400 341 aaKnown RBP19.8■□□□□ 0.76
VIM-205ENST00000485947 MCM5P33992 734 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 SLC4A3P48751 1232 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 EXOSC10Q01780 885 aaKnown RBP19.8■□□□□ 0.76
VIM-205ENST00000485947 PRAMEF19Q5SWL8 479 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 RNF180Q86T96 592 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 AGBL1Q96MI9 1066 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 MTA3Q9BTC8 594 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 SENP6Q9GZR1 1112 aaPredicted RBP19.8■□□□□ 0.76
VIM-205ENST00000485947 ZSWIM5Q9P217 1185 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 CCPG1Q9ULG6 757 aa19.8■□□□□ 0.76
VIM-205ENST00000485947 SNAI1O95863 264 aaPredicted RBP19.79■□□□□ 0.76
VIM-205ENST00000485947 CPA1P15085 419 aa19.79■□□□□ 0.76
VIM-205ENST00000485947 BMP8BP34820 402 aa19.79■□□□□ 0.76
VIM-205ENST00000485947 AK2P54819 239 aa19.79■□□□□ 0.76
VIM-205ENST00000485947 C1orf53Q5VUE5 145 aa19.79■□□□□ 0.76
VIM-205ENST00000485947 FBXL16Q8N461 479 aa19.79■□□□□ 0.76
VIM-205ENST00000485947 UBAC1Q9BSL1 405 aa19.79■□□□□ 0.76
VIM-205ENST00000485947 KAT14Q9H8E8 782 aa19.79■□□□□ 0.76
VIM-205ENST00000485947 A1CFQ9NQ94 594 aaKnown RBP19.79■□□□□ 0.76
VIM-205ENST00000485947 XPNPEP3Q9NQH7 507 aa19.79■□□□□ 0.76
VIM-205ENST00000485947 B4E1Z4 1266 aa19.78■□□□□ 0.76
VIM-205ENST00000485947 ALAS1P13196 640 aa19.78■□□□□ 0.76
VIM-205ENST00000485947 LRRC41Q15345 812 aa19.78■□□□□ 0.76
VIM-205ENST00000485947 ASPRV1Q53RT3 343 aa19.78■□□□□ 0.76
VIM-205ENST00000485947 C7orf61Q8IZ16 206 aa19.78■□□□□ 0.76
VIM-205ENST00000485947 PNMA1Q8ND90 353 aa19.78■□□□□ 0.76
VIM-205ENST00000485947 TSEN34Q9BSV6 310 aaKnown RBP19.78■□□□□ 0.76
VIM-205ENST00000485947 AGXT2Q9BYV1 514 aa19.78■□□□□ 0.76
VIM-205ENST00000485947 HOMER2Q9NSB8 354 aa19.78■□□□□ 0.76
VIM-205ENST00000485947 DUSP11O75319 330 aaKnown RBP19.77■□□□□ 0.76
VIM-205ENST00000485947 ACVR2BQ13705 512 aa19.77■□□□□ 0.76
VIM-205ENST00000485947 GJC2Q5T442 439 aaPredicted RBP19.77■□□□□ 0.76
VIM-205ENST00000485947 TTBK2Q6IQ55 1244 aa19.77■□□□□ 0.76
VIM-205ENST00000485947 CCDC174Q6PII3 467 aa19.77■□□□□ 0.76
VIM-205ENST00000485947 ZSCAN31Q96LW9 406 aaPredicted RBP19.77■□□□□ 0.76
VIM-205ENST00000485947 GPCPD1Q9NPB8 672 aa19.77■□□□□ 0.76
VIM-205ENST00000485947 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.77■□□□□ 0.76
VIM-205ENST00000485947 ADD3Q9UEY8 706 aaKnown RBP19.77■□□□□ 0.76
VIM-205ENST00000485947 LIMCH1Q9UPQ0 1083 aa19.77■□□□□ 0.76
VIM-205ENST00000485947 PHF24Q9UPV7 400 aa19.77■□□□□ 0.76
VIM-205ENST00000485947 MTMR7Q9Y216 660 aa19.77■□□□□ 0.76
VIM-205ENST00000485947 PLXNA1Q9UIW2 1896 aa19.77■□□□□ 0.76
VIM-205ENST00000485947 FRMPD3Q5JV73 1810 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 UNC80Q8N2C7 3258 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 SOX1O00570 391 aaPredicted RBP19.76■□□□□ 0.75
VIM-205ENST00000485947 PRC1O43663 620 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 SLC16A2P36021 539 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 SNX17Q15036 470 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 LRRC26Q2I0M4 334 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 Q6ZUG5 572 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 ARMCX2Q7L311 632 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 ENAHQ8N8S7 591 aaPredicted RBP19.76■□□□□ 0.75
VIM-205ENST00000485947 RGS22Q8NE09 1264 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 TMEM87BQ96K49 555 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 FGD4Q96M96 766 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 GDF15Q99988 308 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 SPC25Q9HBM1 224 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 CYP39A1Q9NYL5 469 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 TNKSO95271 1327 aa19.76■□□□□ 0.75
VIM-205ENST00000485947 FRMPD2Q68DX3 1309 aaPredicted RBP19.76■□□□□ 0.75
VIM-205ENST00000485947 TAL1P17542 331 aaPredicted RBP19.75■□□□□ 0.75
VIM-205ENST00000485947 CST5P28325 142 aaPredicted RBP19.75■□□□□ 0.75
VIM-205ENST00000485947 ANTXR2P58335 489 aa19.75■□□□□ 0.75
VIM-205ENST00000485947 FGD1P98174 961 aa19.75■□□□□ 0.75
VIM-205ENST00000485947 TOB2Q14106 344 aaPredicted RBP19.75■□□□□ 0.75
VIM-205ENST00000485947 CCDC144CPQ8IYA2 1237 aa19.75■□□□□ 0.75
VIM-205ENST00000485947 ZKSCAN3Q9BRR0 538 aa19.75■□□□□ 0.75
VIM-205ENST00000485947 SH2B1Q9NRF2 756 aaPredicted RBP19.75■□□□□ 0.75
VIM-205ENST00000485947 MOXD2PA6NHM9 499 aa19.74■□□□□ 0.75
VIM-205ENST00000485947 NKX3-2P78367 333 aa19.74■□□□□ 0.75
VIM-205ENST00000485947 COL9A3Q14050 684 aaPredicted RBP19.74■□□□□ 0.75
VIM-205ENST00000485947 SART3Q15020 963 aaKnown RBP19.74■□□□□ 0.75
VIM-205ENST00000485947 IFIT1BQ5T764 474 aaKnown RBP19.74■□□□□ 0.75
VIM-205ENST00000485947 SLC39A5Q6ZMH5 540 aa19.74■□□□□ 0.75
VIM-205ENST00000485947 CYB5R4Q7L1T6 521 aa19.74■□□□□ 0.75
VIM-205ENST00000485947 RASGRP2Q7LDG7 609 aa19.74■□□□□ 0.75
VIM-205ENST00000485947 MORC4Q8TE76 937 aa19.74■□□□□ 0.75
VIM-205ENST00000485947 TCEANC2Q96MN5 208 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms