RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 CTDP1Q9Y5B0 961 aaPredicted RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 PCDHA1Q9Y5I3 950 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 A0A1W2PQ27 194 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 A0A1W2PQ64 194 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 A0A1W2PQD8 194 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 ADM5C9JUS6 153 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 RIOK3O14730 519 aaKnown RBP10.88□□□□□ -0.67
CTSA-208ENST00000485627 WDR46O15213 610 aaKnown RBP10.88□□□□□ -0.67
CTSA-208ENST00000485627 PLA2G6O60733 806 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 CUTAO60888 179 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 PTPRAP18433 802 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 TOB1P50616 345 aaPredicted RBP10.88□□□□□ -0.67
CTSA-208ENST00000485627 NONOQ15233 471 aaKnown RBP eCLIP10.88□□□□□ -0.67
CTSA-208ENST00000485627 ZSCAN23Q3MJ62 389 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 NOL9Q5SY16 702 aaKnown RBP10.88□□□□□ -0.67
CTSA-208ENST00000485627 KRI1Q8N9T8 703 aaKnown RBP10.88□□□□□ -0.67
CTSA-208ENST00000485627 FSIP1Q8NA03 581 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 ZNF280CQ8ND82 737 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 ZKSCAN4Q969J2 545 aaPredicted RBP10.88□□□□□ -0.67
CTSA-208ENST00000485627 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 ZIC5Q96T25 663 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 WDR18Q9BV38 432 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 GLIS2Q9BZE0 524 aaPredicted RBP10.88□□□□□ -0.67
CTSA-208ENST00000485627 PSTPIP2Q9H939 334 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 RIC8AQ9NPQ8 531 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 TMEM63CQ9P1W3 806 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 PRR12Q9ULL5 1215 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 PCDHA6Q9UN73 950 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 PCDHB6Q9Y5E3 794 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 PCDHA8Q9Y5H6 950 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 CSADQ9Y600 493 aa10.88□□□□□ -0.67
CTSA-208ENST00000485627 FAM205CA6NFA0 338 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 LIG1P18858 919 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 MAP3K9P80192 1104 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 SPP2Q13103 211 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 MTMR2Q13614 643 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 TTLL12Q14166 644 aaPredicted RBP10.87□□□□□ -0.67
CTSA-208ENST00000485627 PTPAQ15257 358 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 ZNF174Q15697 407 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 EARS2Q5JPH6 523 aaKnown RBP10.87□□□□□ -0.67
CTSA-208ENST00000485627 KIAA1755Q5JYT7 1200 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 JAKMIP3Q5VZ66 844 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 RASGRP4Q8TDF6 673 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 FAM212AQ96EL1 285 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 NUP62CLQ9H1M0 184 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.87□□□□□ -0.67
CTSA-208ENST00000485627 DACT1Q9NYF0 836 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
CTSA-208ENST00000485627 ZHX2Q9Y6X8 837 aa10.87□□□□□ -0.67
CTSA-208ENST00000485627 MYH15Q9Y2K3 1946 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 GOLGA6L3A6NEY3 463 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 C19orf81C9J6K1 198 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 M0R2N6 131 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 KINO60870 393 aaKnown RBP10.86□□□□□ -0.67
CTSA-208ENST00000485627 PPP1R11O60927 126 aaPredicted RBP10.86□□□□□ -0.67
CTSA-208ENST00000485627 USP2O75604 605 aaPredicted RBP10.86□□□□□ -0.67
CTSA-208ENST00000485627 CMA1P23946 247 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 MCM7P33993 719 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 BACE1P56817 501 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 SNAP25P60880 206 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 FAM160A1Q05DH4 1040 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 INF2Q27J81 1249 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 USH1GQ495M9 461 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 MCTP2Q6DN12 878 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 DLK2Q6UY11 383 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 PRPF38AQ8NAV1 312 aaKnown RBP10.86□□□□□ -0.67
CTSA-208ENST00000485627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.86□□□□□ -0.67
CTSA-208ENST00000485627 CDCA5Q96FF9 252 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 TANGO6Q9C0B7 1094 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 TNMDQ9H2S6 317 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 FAM13BQ9NYF5 915 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 TMOD4Q9NZQ9 345 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 FZD1Q9UP38 647 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 SRPRBQ9Y5M8 271 aaKnown RBP10.86□□□□□ -0.67
CTSA-208ENST00000485627 TLL2Q9Y6L7 1015 aa10.86□□□□□ -0.67
CTSA-208ENST00000485627 SYCE3A1L190 88 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 CTAGE5O15320 804 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 ZBED4O75132 1171 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 NR1I2O75469 434 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 PTPREP23469 700 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 ZNF445P59923 1031 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 LETM2Q2VYF4 491 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 NOM1Q5C9Z4 860 aaKnown RBP10.85□□□□□ -0.67
CTSA-208ENST00000485627 CCDC174Q6PII3 467 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 ARMC9Q7Z3E5 817 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 NEK8Q86SG6 692 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 TBCKQ8TEA7 893 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 FERMT2Q96AC1 680 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 NAP1L4Q99733 375 aaKnown RBP10.85□□□□□ -0.67
CTSA-208ENST00000485627 SLF1Q9BQI6 1058 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 RANBP17Q9H2T7 1088 aaKnown RBP10.85□□□□□ -0.67
CTSA-208ENST00000485627 RPAP3Q9H6T3 665 aaPredicted RBP10.85□□□□□ -0.67
CTSA-208ENST00000485627 PNMA2Q9UL42 364 aa10.85□□□□□ -0.67
CTSA-208ENST00000485627 MRPL11Q9Y3B7 192 aaKnown RBP10.85□□□□□ -0.67
CTSA-208ENST00000485627 MORC2Q9Y6X9 1032 aaPredicted RBP10.85□□□□□ -0.67
CTSA-208ENST00000485627 A0A1B0GVL5 298 aa10.84□□□□□ -0.67
CTSA-208ENST00000485627 LAD1O00515 517 aa10.84□□□□□ -0.67
CTSA-208ENST00000485627 CCNT1O60563 726 aaKnown RBP10.84□□□□□ -0.67
CTSA-208ENST00000485627 FLOT1O75955 427 aa10.84□□□□□ -0.67
CTSA-208ENST00000485627 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms