RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 MCMDC2Q4G0Z9 681 aa15.66■□□□□ 0.1
UBA3-210ENST00000485424 RRP12Q5JTH9 1297 aaKnown RBP15.66■□□□□ 0.1
UBA3-210ENST00000485424 ARMCX2Q7L311 632 aa15.66■□□□□ 0.1
UBA3-210ENST00000485424 STAG1Q8WVM7 1258 aa15.66■□□□□ 0.1
UBA3-210ENST00000485424 GMCL1Q96IK5 515 aa15.66■□□□□ 0.1
UBA3-210ENST00000485424 UPF3AQ9H1J1 476 aaKnown RBP15.66■□□□□ 0.1
UBA3-210ENST00000485424 RWDD1Q9H446 243 aaPredicted RBP15.66■□□□□ 0.1
UBA3-210ENST00000485424 ACAD9Q9H845 621 aa15.66■□□□□ 0.1
UBA3-210ENST00000485424 TBX21Q9UL17 535 aa15.66■□□□□ 0.1
UBA3-210ENST00000485424 TMEM265A0A087WTH1 108 aa15.65■□□□□ 0.1
UBA3-210ENST00000485424 C6orf222P0C671 652 aaPredicted RBP15.65■□□□□ 0.1
UBA3-210ENST00000485424 MFAP1P55081 439 aaKnown RBP15.65■□□□□ 0.1
UBA3-210ENST00000485424 CCDC144BQ3MJ40 725 aa15.65■□□□□ 0.1
UBA3-210ENST00000485424 LNPKQ9C0E8 428 aa15.65■□□□□ 0.1
UBA3-210ENST00000485424 ABHD16BQ9H3Z7 469 aa15.65■□□□□ 0.1
UBA3-210ENST00000485424 TET1Q8NFU7 2136 aa15.65■□□□□ 0.1
UBA3-210ENST00000485424 ELP1O95163 1332 aa15.65■□□□□ 0.1
UBA3-210ENST00000485424 MROH7Q68CQ1 1323 aa15.65■□□□□ 0.1
UBA3-210ENST00000485424 BDP1A6H8Y1 2624 aa15.64■□□□□ 0.1
UBA3-210ENST00000485424 TIMP1P01033 207 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 ASGR1P07306 291 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 ALAS1P13196 640 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 FOSL2P15408 326 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 TKFCQ3LXA3 575 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 RCSD1Q6JBY9 416 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 B4GALNT3Q6L9W6 998 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 CCDC174Q6PII3 467 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 KCTD1Q719H9 257 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 CCDC144CPQ8IYA2 1237 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 PCSK9Q8NBP7 692 aaKnown RBP15.64■□□□□ 0.09
UBA3-210ENST00000485424 VTI1AQ96AJ9 217 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 GLT1D1Q96MS3 346 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 KATNBL1Q9H079 304 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 RNF146Q9NTX7 359 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 ANAPC4Q9UJX5 808 aa15.64■□□□□ 0.09
UBA3-210ENST00000485424 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.64■□□□□ 0.09
UBA3-210ENST00000485424 CTAGE5O15320 804 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 NMT2O60551 498 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 DNAJB2P25686 324 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 CDK7P50613 346 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 GJA9P57773 515 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 ALX1Q15699 326 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 VPS53Q5VIR6 699 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 NOL8Q76FK4 1167 aaKnown RBP15.63■□□□□ 0.09
UBA3-210ENST00000485424 TICAM2Q86XR7 235 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 FAM227BQ96M60 508 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 TRERF1Q96PN7 1200 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 INCENPQ9NQS7 918 aa15.63■□□□□ 0.09
UBA3-210ENST00000485424 A0A0D9SFI3 127 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 A0A0U1RQG5 324 aaPredicted RBP15.62■□□□□ 0.09
UBA3-210ENST00000485424 ASB14A6NK59 587 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 ORC4O43929 436 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 PLA2G6O60733 806 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 CNTN2Q02246 1040 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 MFSD5Q6N075 450 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 FAM133AQ8N9E0 248 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 DCAF4Q8WV16 495 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 AGBL1Q96MI9 1066 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.62■□□□□ 0.094e-10■■■■□ 26
UBA3-210ENST00000485424 A1CFQ9NQ94 594 aaKnown RBP15.62■□□□□ 0.09
UBA3-210ENST00000485424 CCPG1Q9ULG6 757 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 COL4A4P53420 1690 aaPredicted RBP15.62■□□□□ 0.09
UBA3-210ENST00000485424 ZNF536O15090 1300 aa15.62■□□□□ 0.09
UBA3-210ENST00000485424 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.61■□□□□ 0.09
UBA3-210ENST00000485424 ARVCFO00192 962 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 FGAP02671 866 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 HSPD1P10809 573 aaKnown RBP15.61■□□□□ 0.09
UBA3-210ENST00000485424 NMIQ13287 307 aaPredicted RBP15.61■□□□□ 0.09
UBA3-210ENST00000485424 PPIGQ13427 754 aaKnown RBP eCLIP15.61■□□□□ 0.091e-9■■■□□ 18.4
UBA3-210ENST00000485424 GNASQ5JWF2 1037 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 MFSD6Q6ZSS7 791 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 RASGRP2Q7LDG7 609 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 FAM126BQ8IXS8 530 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 IL17RBQ9NRM6 502 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 PRR12Q9ULL5 1215 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 ASTN1O14525 1302 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 CCDC171Q6TFL3 1326 aa15.61■□□□□ 0.09
UBA3-210ENST00000485424 XIRP2A4UGR9 3374 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.6■□□□□ 0.09
UBA3-210ENST00000485424 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.6■□□□□ 0.09
UBA3-210ENST00000485424 FOXP2O15409 715 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 TOP1P11387 765 aaKnown RBP15.6■□□□□ 0.09
UBA3-210ENST00000485424 SNAP25P60880 206 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 HAND2P61296 217 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 NKX3-2P78367 333 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 BEX3Q00994 111 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 GRIN2CQ14957 1233 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 NSMFQ6X4W1 530 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 C16orf59Q7L2K0 433 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 RNF41Q9H4P4 317 aaPredicted RBP15.6■□□□□ 0.09
UBA3-210ENST00000485424 ZMYM6O95789 1325 aa15.6■□□□□ 0.09
UBA3-210ENST00000485424 SOWAHBA6NEL2 793 aa15.59■□□□□ 0.09
UBA3-210ENST00000485424 PCP11498 1178 aaKnown RBP15.59■□□□□ 0.09
UBA3-210ENST00000485424 CSF2RAP15509 400 aa15.59■□□□□ 0.09
UBA3-210ENST00000485424 TMEM240Q5SV17 173 aa15.59■□□□□ 0.09
UBA3-210ENST00000485424 RASIP1Q5U651 963 aa15.59■□□□□ 0.09
UBA3-210ENST00000485424 TLK2Q86UE8 772 aa15.59■□□□□ 0.09
UBA3-210ENST00000485424 CHD1LQ86WJ1 897 aa15.59■□□□□ 0.09
UBA3-210ENST00000485424 PPP1R12CQ9BZL4 782 aa15.59■□□□□ 0.09
UBA3-210ENST00000485424 DIAPH3Q9NSV4 1193 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms