RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 ICAM1P05362 532 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 SMARCA1P28370 1054 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 SNAP25P60880 206 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 NBPF11Q86T75 865 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 CPXCR1Q8N123 301 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 COA7Q96BR5 231 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 RIOX1Q9H6W3 641 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 JMJD4Q9H9V9 463 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 SRRDQ9UH36 339 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 CIZ1Q9ULV3 898 aaPredicted RBP21.37■■□□□ 1.01
ERCC2-205ENST00000485403 RIPK3Q9Y572 518 aa21.37■■□□□ 1.01
ERCC2-205ENST00000485403 CYTH3O43739 400 aa21.36■■□□□ 1.01
ERCC2-205ENST00000485403 PRMT2P55345 433 aa21.36■■□□□ 1.01
ERCC2-205ENST00000485403 AKAP17AQ02040 695 aaKnown RBP21.36■■□□□ 1.01
ERCC2-205ENST00000485403 FUT2Q10981 343 aa21.36■■□□□ 1.01
ERCC2-205ENST00000485403 PLEKHH3Q7Z736 793 aa21.36■■□□□ 1.01
ERCC2-205ENST00000485403 CCAR1Q8IX12 1150 aaKnown RBP21.36■■□□□ 1.01
ERCC2-205ENST00000485403 AGBL1Q96MI9 1066 aa21.36■■□□□ 1.01
ERCC2-205ENST00000485403 GJD2Q9UKL4 321 aa21.36■■□□□ 1.01
ERCC2-205ENST00000485403 STK36Q9NRP7 1315 aa21.36■■□□□ 1.01
ERCC2-205ENST00000485403 FDPSP14324 419 aaKnown RBP21.35■■□□□ 1.01
ERCC2-205ENST00000485403 HOXD10P28358 340 aa21.35■■□□□ 1.01
ERCC2-205ENST00000485403 PKN2Q16513 984 aaKnown RBP21.35■■□□□ 1.01
ERCC2-205ENST00000485403 CDC37Q16543 378 aaPredicted RBP21.35■■□□□ 1.01
ERCC2-205ENST00000485403 CCDC174Q6PII3 467 aa21.35■■□□□ 1.01
ERCC2-205ENST00000485403 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.35■■□□□ 1.01
ERCC2-205ENST00000485403 NCAPG2Q86XI2 1143 aa21.35■■□□□ 1.01
ERCC2-205ENST00000485403 SPZ1Q9BXG8 430 aa21.35■■□□□ 1.01
ERCC2-205ENST00000485403 CHMP5Q9NZZ3 219 aa21.35■■□□□ 1.01
ERCC2-205ENST00000485403 PNMA2Q9UL42 364 aa21.35■■□□□ 1.01
ERCC2-205ENST00000485403 PRPF3O43395 683 aaKnown RBP21.34■■□□□ 1.01
ERCC2-205ENST00000485403 PDCP20941 246 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 PRKCZQ05513 592 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 MORN1Q5T089 497 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 COL13A1Q5TAT6 717 aaPredicted RBP21.34■■□□□ 1.01
ERCC2-205ENST00000485403 LARP1BQ659C4 914 aaKnown RBP21.34■■□□□ 1.01
ERCC2-205ENST00000485403 RNF26Q9BY78 433 aaPredicted RBP21.34■■□□□ 1.01
ERCC2-205ENST00000485403 PTPN22Q9Y2R2 807 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 CNTNAP5Q8WYK1 1306 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 STRNO43815 780 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 PTPREP23469 700 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 GRB14Q14449 540 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 QRICH1Q2TAL8 776 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 TKFCQ3LXA3 575 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 ABRAQ8N0Z2 381 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 CHST13Q8NET6 341 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 SOCS4Q8WXH5 440 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 WASF1Q92558 559 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 USP6NLQ92738 828 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 CCPG1Q9ULG6 757 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 GABRQQ9UN88 632 aa21.34■■□□□ 1.01
ERCC2-205ENST00000485403 V9GY48 417 aaPredicted RBP21.34■■□□□ 1.01
ERCC2-205ENST00000485403 SLC15A5A6NIM6 579 aa21.33■■□□□ 1
ERCC2-205ENST00000485403 WDR78Q5VTH9 848 aa21.33■■□□□ 1
ERCC2-205ENST00000485403 VAT1LQ9HCJ6 419 aa21.33■■□□□ 1
ERCC2-205ENST00000485403 IVNS1ABPQ9Y6Y0 642 aa21.33■■□□□ 1
ERCC2-205ENST00000485403 ZBTB5O15062 677 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 DEXIO95424 95 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 SYT1P21579 422 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 FLT3LGP49771 235 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 FOSBP53539 338 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 NUCB2P80303 420 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 IRF5Q13568 498 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 PIBF1Q8WXW3 757 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 NUDT12Q9BQG2 462 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 RBM27Q9P2N5 1060 aaKnown RBP21.32■■□□□ 1
ERCC2-205ENST00000485403 FBXO40Q9UH90 709 aa21.32■■□□□ 1
ERCC2-205ENST00000485403 PLXNA1Q9UIW2 1896 aa21.31■■□□□ 1
ERCC2-205ENST00000485403 FBXO46Q6PJ61 603 aaPredicted RBP21.31■■□□□ 1
ERCC2-205ENST00000485403 PIGSQ96S52 555 aa21.31■■□□□ 1
ERCC2-205ENST00000485403 ALG1Q9BT22 464 aa21.31■■□□□ 1
ERCC2-205ENST00000485403 ACAD9Q9H845 621 aa21.31■■□□□ 1
ERCC2-205ENST00000485403 RNF146Q9NTX7 359 aa21.31■■□□□ 1
ERCC2-205ENST00000485403 hCG_1642624A0A1W2PR95 340 aa21.3■■□□□ 1
ERCC2-205ENST00000485403 STX6O43752 255 aa21.3■■□□□ 1
ERCC2-205ENST00000485403 PPP1R11O60927 126 aaPredicted RBP21.3■■□□□ 1
ERCC2-205ENST00000485403 FCER1AP12319 257 aa21.3■■□□□ 1
ERCC2-205ENST00000485403 ALAS1P13196 640 aa21.3■■□□□ 1
ERCC2-205ENST00000485403 TAL1P17542 331 aaPredicted RBP21.3■■□□□ 1
ERCC2-205ENST00000485403 TRERF1Q96PN7 1200 aa21.3■■□□□ 1
ERCC2-205ENST00000485403 MCOLN1Q9GZU1 580 aa21.3■■□□□ 1
ERCC2-205ENST00000485403 HOMER2Q9NSB8 354 aa21.3■■□□□ 1
ERCC2-205ENST00000485403 PTCH2Q9Y6C5 1203 aa21.3■■□□□ 1
ERCC2-205ENST00000485403 BRCA2P51587 3418 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 PNMA6FA0A0J9YX94 578 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 HOXC6P09630 235 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 XRCC5P13010 732 aaKnown RBP21.29■■□□□ 1
ERCC2-205ENST00000485403 PDIA4P13667 645 aaKnown RBP21.29■■□□□ 1
ERCC2-205ENST00000485403 ADORA2AP29274 412 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 MAP2K5Q13163 448 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 FBXO11Q86XK2 927 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 RRP36Q96EU6 259 aaKnown RBP21.29■■□□□ 1
ERCC2-205ENST00000485403 C8orf76Q96K31 380 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 AIFM3Q96NN9 605 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 AMNQ9BXJ7 453 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 RBBP6Q7Z6E9 1792 aaKnown RBP21.29■■□□□ 1
ERCC2-205ENST00000485403 VPS37CA5D8V6 355 aaPredicted RBP21.29■■□□□ 1
ERCC2-205ENST00000485403 H3BQV1 296 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 RGS2P41220 211 aa21.29■■□□□ 1
ERCC2-205ENST00000485403 PKP1Q13835 747 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms