RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	R3HDM1	Q15032	1099 aa	Known RBP	6.25	□□□□□ -1.41
VPS8-223	ENST00000485024	ZNF585A	Q6P3V2	769 aa		6.25	□□□□□ -1.41
VPS8-223	ENST00000485024	SMARCC2	Q8TAQ2	1214 aa		6.25	□□□□□ -1.41
VPS8-223	ENST00000485024	CHFR	Q96EP1	664 aa		6.25	□□□□□ -1.41
VPS8-223	ENST00000485024	PPP4R1L	Q9P1A2	415 aa		6.25	□□□□□ -1.41
VPS8-223	ENST00000485024	ZNF16	P17020	682 aa	Predicted RBP	6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	GBP1	P32455	592 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	CTSK	P43235	329 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	MAPK8	P45983	427 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	BICRAL	Q6AI39	1079 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	FBXO41	Q8TF61	875 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	GIPC2	Q8TF65	315 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	ALG3	Q92685	438 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	ZBTB8A	Q96BR9	441 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	SPG7	Q9UQ90	795 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	PRR36	Q9H6K5	1346 aa		6.24	□□□□□ -1.41
VPS8-223	ENST00000485024	ENDOU	P21128	410 aa	Known RBP	6.23	□□□□□ -1.41
VPS8-223	ENST00000485024	SMAD4	Q13485	552 aa	Known RBP	6.23	□□□□□ -1.41
VPS8-223	ENST00000485024	SPDYA	Q5MJ70	313 aa		6.23	□□□□□ -1.41
VPS8-223	ENST00000485024	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.23	□□□□□ -1.41
VPS8-223	ENST00000485024	TTLL7	Q6ZT98	887 aa		6.23	□□□□□ -1.41
VPS8-223	ENST00000485024	DNER	Q8NFT8	737 aa		6.23	□□□□□ -1.41
VPS8-223	ENST00000485024	MRRF	Q96E11	262 aa	Known RBP	6.23	□□□□□ -1.41
VPS8-223	ENST00000485024	TLR6	Q9Y2C9	796 aa		6.23	□□□□□ -1.41
VPS8-223	ENST00000485024	MEIS1	O00470	390 aa		6.22	□□□□□ -1.41
VPS8-223	ENST00000485024	VAMP1	P23763	118 aa		6.22	□□□□□ -1.41
VPS8-223	ENST00000485024	BMP8B	P34820	402 aa		6.22	□□□□□ -1.41
VPS8-223	ENST00000485024	NANOS3	P60323	173 aa	Known RBP	6.22	□□□□□ -1.41
VPS8-223	ENST00000485024	EAPP	Q56P03	285 aa	Predicted RBP	6.22	□□□□□ -1.41
VPS8-223	ENST00000485024	CHST7	Q9NS84	486 aa		6.22	□□□□□ -1.41
VPS8-223	ENST00000485024		A0A1W2PQ27	194 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024		A0A1W2PQ64	194 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024		A0A1W2PQC6	194 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024		A0A1W2PQD8	194 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	RGS13	O14921	159 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	GPR42	O15529	346 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	CHMP4BP1	P59074	171 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	FMR1	Q06787	632 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	KIAA2012	Q0VF49	1180 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	RTP2	Q5QGT7	225 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	ALG1L	Q6GMV1	187 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	WWC2-AS2	Q96NR7	200 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	CECR2	Q9BXF3	1484 aa		6.21	□□□□□ -1.42
VPS8-223	ENST00000485024	MROH6	A6NGR9	719 aa		6.2	□□□□□ -1.42
VPS8-223	ENST00000485024	NPIPB8	E9PQR5	432 aa		6.2	□□□□□ -1.42
VPS8-223	ENST00000485024	HTR3B	O95264	441 aa		6.2	□□□□□ -1.42
VPS8-223	ENST00000485024	VAV1	P15498	845 aa		6.2	□□□□□ -1.42
VPS8-223	ENST00000485024	PURA	Q00577	322 aa	Known RBP	6.2	□□□□□ -1.42
VPS8-223	ENST00000485024	BORA	Q6PGQ7	559 aa		6.2	□□□□□ -1.42
VPS8-223	ENST00000485024	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.2	□□□□□ -1.42
VPS8-223	ENST00000485024	PDLIM7	Q9NR12	457 aa		6.2	□□□□□ -1.42
VPS8-223	ENST00000485024	WDR33	Q9C0J8	1336 aa	Known RBP	6.2	□□□□□ -1.42
VPS8-223	ENST00000485024	FAM221A	A4D161	298 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	UNCX	A6NJT0	531 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	LAMTOR5	O43504	91 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	ACR	P10323	421 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	TACR1	P25103	407 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	C9orf131	Q5VYM1	1079 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	IGFL4	Q6B9Z1	124 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	CRTC3	Q6UUV7	619 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	LINC00482	Q8N8I6	264 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	ZNF341	Q9BYN7	854 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	IKZF4	Q9H2S9	585 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	RXFP1	Q9HBX9	757 aa		6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	DBR1	Q9UK59	544 aa	Known RBP	6.19	□□□□□ -1.42
VPS8-223	ENST00000485024	FAM26F	Q5R3K3	315 aa		6.18	□□□□□ -1.42
VPS8-223	ENST00000485024	ANTXR1	Q9H6X2	564 aa		6.18	□□□□□ -1.42
VPS8-223	ENST00000485024		A0A1W2PQJ5	194 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	B4GALT3	O60512	393 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	SELENOP	P49908	381 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	ATP2B2	Q01814	1243 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	FBXO33	Q7Z6M2	555 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	CPA5	Q8WXQ8	436 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	DDX11	Q96FC9	970 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	CEP89	Q96ST8	783 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	DEF6	Q9H4E7	631 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	DLL4	Q9NR61	685 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	GFOD1	Q9NXC2	390 aa		6.17	□□□□□ -1.42
VPS8-223	ENST00000485024	MUSK	O15146	869 aa		6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	SMARCA5	O60264	1052 aa	Predicted RBP	6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	BPNT1	O95861	308 aa		6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	TCF3	P15923	654 aa		6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	RPL13	P26373	211 aa	Known RBP	6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	THBS2	P35442	1172 aa		6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	CACNB2	Q08289	660 aa	Predicted RBP	6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	MCTP2	Q6DN12	878 aa		6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	FAM124A	Q86V42	546 aa		6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	JAML	Q86YT9	394 aa		6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	TSPAN17	Q96FV3	270 aa		6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	SYT3	Q9BQG1	590 aa		6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	KIAA1522	Q9P206	1035 aa	Predicted RBP	6.16	□□□□□ -1.42
VPS8-223	ENST00000485024	XPC	Q01831	940 aa	Predicted RBP	6.15	□□□□□ -1.42
VPS8-223	ENST00000485024	HLA-DQA1	Q5Y7H0	255 aa		6.15	□□□□□ -1.42
VPS8-223	ENST00000485024	PHC3	Q8NDX5	983 aa		6.15	□□□□□ -1.42
VPS8-223	ENST00000485024	IGDCC4	Q8TDY8	1250 aa		6.15	□□□□□ -1.42
VPS8-223	ENST00000485024	GORASP1	Q9BQQ3	440 aa		6.15	□□□□□ -1.42
VPS8-223	ENST00000485024	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.15	□□□□□ -1.42
VPS8-223	ENST00000485024	IGSF5	Q9NSI5	407 aa		6.15	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms