RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 CST5P28325 142 aaPredicted RBP33.37■■■□□ 2.93
HLA-C-207ENST00000484378 ZKSCAN3Q9BRR0 538 aa33.37■■■□□ 2.93
HLA-C-207ENST00000484378 LRRC37A2A6NM11 1700 aa33.36■■■□□ 2.93
HLA-C-207ENST00000484378 CLTBP09497 229 aa33.36■■■□□ 2.93
HLA-C-207ENST00000484378 ZNF543Q08ER8 600 aa33.36■■■□□ 2.93
HLA-C-207ENST00000484378 CCSAPQ6IQ19 270 aaPredicted RBP33.36■■■□□ 2.93
HLA-C-207ENST00000484378 BADQ92934 168 aa33.36■■■□□ 2.93
HLA-C-207ENST00000484378 DSCC1Q9BVC3 393 aa33.36■■■□□ 2.93
HLA-C-207ENST00000484378 UPF3AQ9H1J1 476 aaKnown RBP33.36■■■□□ 2.93
HLA-C-207ENST00000484378 ASTN1O14525 1302 aa33.35■■■□□ 2.93
HLA-C-207ENST00000484378 TRIM43BA6NCK2 446 aa33.35■■■□□ 2.93
HLA-C-207ENST00000484378 NT5C2P49902 561 aa33.35■■■□□ 2.93
HLA-C-207ENST00000484378 GJA9P57773 515 aa33.35■■■□□ 2.93
HLA-C-207ENST00000484378 PCSK9Q8NBP7 692 aaKnown RBP33.35■■■□□ 2.93
HLA-C-207ENST00000484378 TRIM43Q96BQ3 446 aaPredicted RBP33.35■■■□□ 2.93
HLA-C-207ENST00000484378 IRX5P78411 483 aaPredicted RBP33.34■■■□□ 2.93
HLA-C-207ENST00000484378 IMMTQ16891 758 aaKnown RBP33.34■■■□□ 2.93
HLA-C-207ENST00000484378 NOL8Q76FK4 1167 aaKnown RBP33.34■■■□□ 2.93
HLA-C-207ENST00000484378 IQCA1Q86XH1 822 aa33.34■■■□□ 2.93
HLA-C-207ENST00000484378 GLT1D1Q96MS3 346 aa33.34■■■□□ 2.93
HLA-C-207ENST00000484378 KDM4AO75164 1064 aa33.33■■■□□ 2.93
HLA-C-207ENST00000484378 SNHG28P0DPA3 235 aa33.33■■■□□ 2.93
HLA-C-207ENST00000484378 PDE4AP27815 886 aa33.33■■■□□ 2.93
HLA-C-207ENST00000484378 TNFAIP2Q03169 654 aa33.33■■■□□ 2.93
HLA-C-207ENST00000484378 DGKHQ86XP1 1220 aa33.33■■■□□ 2.93
HLA-C-207ENST00000484378 DEFB123Q8N688 67 aa33.33■■■□□ 2.93
HLA-C-207ENST00000484378 CTNNA3Q9UI47 895 aa33.33■■■□□ 2.93
HLA-C-207ENST00000484378 DDX49Q9Y6V7 483 aaKnown RBP33.33■■■□□ 2.93
HLA-C-207ENST00000484378 LCTP09848 1927 aa33.33■■■□□ 2.93
HLA-C-207ENST00000484378 NFIBO00712 420 aa33.32■■■□□ 2.92
HLA-C-207ENST00000484378 ASGR1P07306 291 aa33.32■■■□□ 2.92
HLA-C-207ENST00000484378 IRX6P78412 446 aaPredicted RBP33.32■■■□□ 2.92
HLA-C-207ENST00000484378 CCDC178Q5BJE1 867 aa33.32■■■□□ 2.92
HLA-C-207ENST00000484378 GNASQ5JWF2 1037 aa33.32■■■□□ 2.92
HLA-C-207ENST00000484378 PNMA2Q9UL42 364 aa33.32■■■□□ 2.92
HLA-C-207ENST00000484378 C11orf97A0A1B0GVM6 126 aaPredicted RBP33.31■■■□□ 2.92
HLA-C-207ENST00000484378 B4E1Z4 1266 aa33.31■■■□□ 2.92
HLA-C-207ENST00000484378 BAATQ14032 418 aaPredicted RBP33.31■■■□□ 2.92
HLA-C-207ENST00000484378 GPATCH4Q5T3I0 446 aaKnown RBP33.31■■■□□ 2.92
HLA-C-207ENST00000484378 ANKRD33Q7Z3H0 272 aa33.31■■■□□ 2.92
HLA-C-207ENST00000484378 ELP1O95163 1332 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 DCDC2CA8MYV0 355 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 TTC22Q5TAA0 569 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 Q7L0L9 218 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 EEPD1Q7L9B9 569 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 FBXO16Q8IX29 292 aaPredicted RBP33.3■■■□□ 2.92
HLA-C-207ENST00000484378 PNMA1Q8ND90 353 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 VTI1AQ96AJ9 217 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 TOX2Q96NM4 488 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 PURBQ96QR8 312 aaKnown RBP33.3■■■□□ 2.92
HLA-C-207ENST00000484378 KAT14Q9H8E8 782 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 TMEM39AQ9NV64 488 aa33.3■■■□□ 2.92
HLA-C-207ENST00000484378 ADD3Q9UEY8 706 aaKnown RBP33.3■■■□□ 2.92
HLA-C-207ENST00000484378 PTPDC1A2A3K4 754 aa33.29■■■□□ 2.92
HLA-C-207ENST00000484378 KIAA0355O15063 1070 aa33.29■■■□□ 2.92
HLA-C-207ENST00000484378 GSPT1P15170 499 aaKnown RBP33.29■■■□□ 2.92
HLA-C-207ENST00000484378 RAG1P15918 1043 aa33.29■■■□□ 2.92
HLA-C-207ENST00000484378 TLK2Q86UE8 772 aa33.29■■■□□ 2.92
HLA-C-207ENST00000484378 COL6A3P12111 3177 aa33.29■■■□□ 2.92
HLA-C-207ENST00000484378 GOLGA8HP0CJ92 632 aa33.28■■■□□ 2.92
HLA-C-207ENST00000484378 ZSCAN10Q96SZ4 725 aaPredicted RBP33.28■■■□□ 2.92
HLA-C-207ENST00000484378 MROH7Q68CQ1 1323 aa33.28■■■□□ 2.92
HLA-C-207ENST00000484378 WDR19Q8NEZ3 1342 aa33.28■■■□□ 2.92
HLA-C-207ENST00000484378 ITGB8P26012 769 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 BEX3Q00994 111 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 FAAP100Q0VG06 881 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 SHHQ15465 462 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 C9orf50Q5SZB4 431 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 SLC30A10Q6XR72 485 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 KRT23Q9C075 422 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 AP5M1Q9H0R1 490 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 IL25Q9H293 177 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 CNNM2Q9H8M5 875 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 VTA1Q9NP79 307 aa33.27■■■□□ 2.92
HLA-C-207ENST00000484378 GNEQ9Y223 722 aaKnown RBP33.27■■■□□ 2.92
HLA-C-207ENST00000484378 A0A0U1RQG5 324 aaPredicted RBP33.26■■■□□ 2.91
HLA-C-207ENST00000484378 CTAGE5O15320 804 aa33.26■■■□□ 2.91
HLA-C-207ENST00000484378 ALDH5A1P51649 535 aaPredicted RBP33.26■■■□□ 2.91
HLA-C-207ENST00000484378 NKX3-2P78367 333 aa33.26■■■□□ 2.91
HLA-C-207ENST00000484378 MORC4Q8TE76 937 aa33.26■■■□□ 2.91
HLA-C-207ENST00000484378 CLEC4DQ8WXI8 215 aa33.26■■■□□ 2.91
HLA-C-207ENST00000484378 PDGFCQ9NRA1 345 aa33.26■■■□□ 2.91
HLA-C-207ENST00000484378 TNKSO95271 1327 aa33.26■■■□□ 2.91
HLA-C-207ENST00000484378 SMPD1P17405 629 aa33.25■■■□□ 2.91
HLA-C-207ENST00000484378 CALML3P27482 149 aa33.25■■■□□ 2.91
HLA-C-207ENST00000484378 IQSEC1Q6DN90 963 aa33.25■■■□□ 2.91
HLA-C-207ENST00000484378 TAPT1Q6NXT6 567 aa33.25■■■□□ 2.91
HLA-C-207ENST00000484378 RNF207Q6ZRF8 634 aa33.25■■■□□ 2.91
HLA-C-207ENST00000484378 ENAHQ8N8S7 591 aaPredicted RBP33.25■■■□□ 2.91
HLA-C-207ENST00000484378 ZSWIM5Q9P217 1185 aa33.25■■■□□ 2.91
HLA-C-207ENST00000484378 RAD50Q92878 1312 aa33.25■■■□□ 2.91
HLA-C-207ENST00000484378 FSCN1Q16658 493 aaKnown RBP33.24■■■□□ 2.91
HLA-C-207ENST00000484378 ANKS1AQ92625 1134 aa33.24■■■□□ 2.91
HLA-C-207ENST00000484378 UBAC1Q9BSL1 405 aa33.24■■■□□ 2.91
HLA-C-207ENST00000484378 UBA5Q9GZZ9 404 aa33.24■■■□□ 2.91
HLA-C-207ENST00000484378 CPVLQ9H3G5 476 aa33.24■■■□□ 2.91
HLA-C-207ENST00000484378 LOC102724159A0A0B4J2E5 919 aa33.23■■■□□ 2.91
HLA-C-207ENST00000484378 DYNC1LI2O43237 492 aaPredicted RBP33.23■■■□□ 2.91
HLA-C-207ENST00000484378 PWP2Q15269 919 aaKnown RBP33.23■■■□□ 2.91
HLA-C-207ENST00000484378 USH1GQ495M9 461 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms