RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 C9orf50Q5SZB4 431 aa22.59■■□□□ 1.21
NDUFA3-213ENST00000484103 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.59■■□□□ 1.21
NDUFA3-213ENST00000484103 ESR2Q92731 530 aa22.59■■□□□ 1.21
NDUFA3-213ENST00000484103 FAM161BQ96MY7 647 aa22.59■■□□□ 1.21
NDUFA3-213ENST00000484103 RANBP17Q9H2T7 1088 aaKnown RBP22.59■■□□□ 1.21
NDUFA3-213ENST00000484103 RNF41Q9H4P4 317 aaPredicted RBP22.59■■□□□ 1.21
NDUFA3-213ENST00000484103 SPC25Q9HBM1 224 aa22.59■■□□□ 1.21
NDUFA3-213ENST00000484103 PTPDC1A2A3K4 754 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 NFIBO00712 420 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 KDM4AO75164 1064 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 ASGR1P07306 291 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 ITGB8P26012 769 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 PDE4AP27815 886 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 TNFAIP2Q03169 654 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 SHHQ15465 462 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 GNASQ5JWF2 1037 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 KLHDC9Q8NEP7 349 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 NUP133Q8WUM0 1156 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 PDGFCQ9NRA1 345 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 TCP11L1Q9NUJ3 509 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 TMEM39AQ9NV64 488 aa22.58■■□□□ 1.21
NDUFA3-213ENST00000484103 B4E1Z4 1266 aa22.57■■□□□ 1.2
NDUFA3-213ENST00000484103 BAATQ14032 418 aaPredicted RBP22.57■■□□□ 1.2
NDUFA3-213ENST00000484103 TMEM63BQ5T3F8 832 aa22.57■■□□□ 1.2
NDUFA3-213ENST00000484103 TSEN34Q9BSV6 310 aaKnown RBP22.57■■□□□ 1.2
NDUFA3-213ENST00000484103 UBA5Q9GZZ9 404 aa22.57■■□□□ 1.2
NDUFA3-213ENST00000484103 KATNBL1Q9H079 304 aa22.57■■□□□ 1.2
NDUFA3-213ENST00000484103 IL25Q9H293 177 aa22.57■■□□□ 1.2
NDUFA3-213ENST00000484103 ASB14A6NK59 587 aa22.56■■□□□ 1.2
NDUFA3-213ENST00000484103 HIP1O00291 1037 aa22.56■■□□□ 1.2
NDUFA3-213ENST00000484103 RAG1P15918 1043 aa22.56■■□□□ 1.2
NDUFA3-213ENST00000484103 CALML3P27482 149 aa22.56■■□□□ 1.2
NDUFA3-213ENST00000484103 ZNF543Q08ER8 600 aa22.56■■□□□ 1.2
NDUFA3-213ENST00000484103 USH1GQ495M9 461 aa22.56■■□□□ 1.2
NDUFA3-213ENST00000484103 SLC30A10Q6XR72 485 aa22.56■■□□□ 1.2
NDUFA3-213ENST00000484103 GLT1D1Q96MS3 346 aa22.56■■□□□ 1.2
NDUFA3-213ENST00000484103 MOXD2PA6NHM9 499 aa22.55■■□□□ 1.2
NDUFA3-213ENST00000484103 C1orf53Q5VUE5 145 aa22.55■■□□□ 1.2
NDUFA3-213ENST00000484103 CCSAPQ6IQ19 270 aaPredicted RBP22.55■■□□□ 1.2
NDUFA3-213ENST00000484103 BTNL9Q6UXG8 535 aa22.55■■□□□ 1.2
NDUFA3-213ENST00000484103 TLK2Q86UE8 772 aa22.55■■□□□ 1.2
NDUFA3-213ENST00000484103 TICAM2Q86XR7 235 aa22.55■■□□□ 1.2
NDUFA3-213ENST00000484103 LAMA4Q16363 1823 aa22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 LRRC37A2A6NM11 1700 aa22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 LAMA2P24043 3122 aaKnown RBP22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 DCDC2CA8MYV0 355 aa22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 DYNC1LI2O43237 492 aaPredicted RBP22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 GSPT1P15170 499 aaKnown RBP22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 GJA9P57773 515 aa22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 FAAP100Q0VG06 881 aa22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 IMMTQ16891 758 aaKnown RBP22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 PCSK9Q8NBP7 692 aaKnown RBP22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 KAT14Q9H8E8 782 aa22.54■■□□□ 1.2
NDUFA3-213ENST00000484103 LCTP09848 1927 aa22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 PCP11498 1178 aaKnown RBP22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 SMPD1P17405 629 aa22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 EPHB4P54760 987 aa22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 CXCL17Q6UXB2 119 aa22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 KIAA1211Q6ZU35 1233 aa22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 IQCA1Q86XH1 822 aa22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 TTC14Q96N46 770 aa22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 AP5M1Q9H0R1 490 aa22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 UPF3AQ9H1J1 476 aaKnown RBP22.53■■□□□ 1.2
NDUFA3-213ENST00000484103 DHX16O60231 1041 aaKnown RBP22.52■■□□□ 1.2
NDUFA3-213ENST00000484103 CST5P28325 142 aaPredicted RBP22.52■■□□□ 1.2
NDUFA3-213ENST00000484103 TTC22Q5TAA0 569 aa22.52■■□□□ 1.2
NDUFA3-213ENST00000484103 PNMA1Q8ND90 353 aa22.52■■□□□ 1.2
NDUFA3-213ENST00000484103 DSCC1Q9BVC3 393 aa22.52■■□□□ 1.2
NDUFA3-213ENST00000484103 CTAGE5O15320 804 aa22.51■■□□□ 1.19
NDUFA3-213ENST00000484103 ALDH5A1P51649 535 aaPredicted RBP22.51■■□□□ 1.19
NDUFA3-213ENST00000484103 RNF207Q6ZRF8 634 aa22.51■■□□□ 1.19
NDUFA3-213ENST00000484103 CLEC4DQ8WXI8 215 aa22.51■■□□□ 1.19
NDUFA3-213ENST00000484103 ZSCAN10Q96SZ4 725 aaPredicted RBP22.51■■□□□ 1.19
NDUFA3-213ENST00000484103 PPP1R12CQ9BZL4 782 aa22.51■■□□□ 1.19
NDUFA3-213ENST00000484103 MTMR10Q9NXD2 777 aa22.51■■□□□ 1.19
NDUFA3-213ENST00000484103 COL6A3P12111 3177 aa22.51■■□□□ 1.19
NDUFA3-213ENST00000484103 TNKSO95271 1327 aa22.51■■□□□ 1.19
NDUFA3-213ENST00000484103 A0A0U1RQG5 324 aaPredicted RBP22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 KIAA0355O15063 1070 aa22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 FPGSQ05932 587 aa22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 FSCN1Q16658 493 aaKnown RBP22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 TAPT1Q6NXT6 567 aa22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 ANKRD33Q7Z3H0 272 aa22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 DGKHQ86XP1 1220 aa22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 RNPC3Q96LT9 517 aaKnown RBP22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 VAT1LQ9HCJ6 419 aa22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 ZSWIM5Q9P217 1185 aa22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 CTNNA3Q9UI47 895 aa22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 GNEQ9Y223 722 aaKnown RBP22.5■■□□□ 1.19
NDUFA3-213ENST00000484103 SNHG28P0DPA3 235 aa22.49■■□□□ 1.19
NDUFA3-213ENST00000484103 PSMC6P62333 389 aa22.49■■□□□ 1.19
NDUFA3-213ENST00000484103 CDC37Q16543 378 aaPredicted RBP22.49■■□□□ 1.19
NDUFA3-213ENST00000484103 GPR153Q6NV75 609 aa22.49■■□□□ 1.19
NDUFA3-213ENST00000484103 ENAHQ8N8S7 591 aaPredicted RBP22.49■■□□□ 1.19
NDUFA3-213ENST00000484103 SLC17A8Q8NDX2 589 aa22.49■■□□□ 1.19
NDUFA3-213ENST00000484103 UBAC1Q9BSL1 405 aa22.49■■□□□ 1.19
NDUFA3-213ENST00000484103 ADD3Q9UEY8 706 aaKnown RBP22.49■■□□□ 1.19
NDUFA3-213ENST00000484103 ELP1O95163 1332 aa22.49■■□□□ 1.19
NDUFA3-213ENST00000484103 ARVCFO00192 962 aa22.48■■□□□ 1.19
NDUFA3-213ENST00000484103 RPS6P62753 249 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms