RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 PI4KBQ9UBF8 816 aa10.71□□□□□ -0.69
COL8A1-207ENST00000483969 FZD1Q9UP38 647 aa10.71□□□□□ -0.69
COL8A1-207ENST00000483969 USP3Q9Y6I4 520 aa10.71□□□□□ -0.69
COL8A1-207ENST00000483969 ARAP2Q8WZ64 1704 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 DDTLA6NHG4 134 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-207ENST00000483969 FAM155AB1AL88 458 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-207ENST00000483969 AOC2O75106 756 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 HLA-DOAP06340 250 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 SKIP12755 728 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 INHBEP58166 350 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 KIF23Q02241 960 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-207ENST00000483969 TTC6Q86TZ1 520 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 RASAL3Q86YV0 1011 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 MAPKAPK5Q8IW41 473 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL8A1-207ENST00000483969 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 ZIC5Q96T25 663 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 FSD1Q9BTV5 496 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
COL8A1-207ENST00000483969 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.69□□□□□ -0.7
COL8A1-207ENST00000483969 PLEKHM2Q8IWE5 1019 aa10.69□□□□□ -0.7
COL8A1-207ENST00000483969 APPBP2Q92624 585 aa10.69□□□□□ -0.7
COL8A1-207ENST00000483969 ARMT1Q9H993 441 aa10.69□□□□□ -0.7
COL8A1-207ENST00000483969 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL8A1-207ENST00000483969 ATP8A2Q9NTI2 1148 aa10.69□□□□□ -0.7
COL8A1-207ENST00000483969 SCHIP1Q9P0W5 487 aaPredicted RBP10.69□□□□□ -0.7
COL8A1-207ENST00000483969 HERC5Q9UII4 1024 aaKnown RBP10.69□□□□□ -0.7
COL8A1-207ENST00000483969 ATRNL1Q5VV63 1379 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 ZNF646O15015 1829 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-207ENST00000483969 FLT1P17948 1338 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 MBD4O95243 580 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 POLR3DP05423 398 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-207ENST00000483969 ZBTB48P10074 688 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-207ENST00000483969 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 CENPQQ7L2Z9 268 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-207ENST00000483969 FCHSD1Q86WN1 690 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 AMOTL1Q8IY63 956 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 LCORLQ8N3X6 602 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-207ENST00000483969 ZKSCAN4Q969J2 545 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-207ENST00000483969 WNK4Q96J92 1243 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 CLMNQ96JQ2 1002 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 ELP3Q9H9T3 547 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 SAP30BPQ9UHR5 308 aaKnown RBP10.68□□□□□ -0.7
COL8A1-207ENST00000483969 PALD1Q9ULE6 856 aa10.68□□□□□ -0.7
COL8A1-207ENST00000483969 GPC6Q9Y625 555 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-207ENST00000483969 RFX7Q2KHR2 1363 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 MANSC4A6NHS7 340 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-207ENST00000483969 EFSO43281 561 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 CA12O43570 354 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 CTNND1O60716 968 aaKnown RBP10.67□□□□□ -0.7
COL8A1-207ENST00000483969 GNAT2P19087 354 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 TM4SF4P48230 202 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 PPATQ06203 517 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 SREBF2Q12772 1141 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 VGLL4Q14135 290 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 RILPL2Q969X0 211 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 OPTNQ96CV9 577 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 STRBPQ96SI9 672 aaKnown RBP10.67□□□□□ -0.7
COL8A1-207ENST00000483969 PUS7LQ9H0K6 701 aaKnown RBP10.67□□□□□ -0.7
COL8A1-207ENST00000483969 PICK1Q9NRD5 415 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 MCM9Q9NXL9 1143 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 MARK1Q9P0L2 795 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 HCN2Q9UL51 889 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 PRR12Q9ULL5 1215 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 SLC4A4Q9Y6R1 1079 aa10.67□□□□□ -0.7
COL8A1-207ENST00000483969 SSC5DA1L4H1 1573 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 PATL2C9JE40 543 aaKnown RBP10.66□□□□□ -0.7
COL8A1-207ENST00000483969 HSPA1AP0DMV8 641 aaKnown RBP10.66□□□□□ -0.7
COL8A1-207ENST00000483969 HSPA1BP0DMV9 641 aaKnown RBP10.66□□□□□ -0.7
COL8A1-207ENST00000483969 INPP5BP32019 993 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 NCOA4Q13772 614 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 NOL9Q5SY16 702 aaKnown RBP10.66□□□□□ -0.7
COL8A1-207ENST00000483969 OTUD7BQ6GQQ9 843 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 GIMAP6Q6P9H5 292 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 METTL16Q86W50 562 aaKnown RBP10.66□□□□□ -0.7
COL8A1-207ENST00000483969 SCYL3Q8IZE3 742 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 OSBP2Q969R2 916 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 ALG2Q9H553 416 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 DCP1AQ9NPI6 582 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-207ENST00000483969 HELLSQ9NRZ9 838 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 GINM1Q9NU53 330 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 ZNF358Q9NW07 568 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 KLF15Q9UIH9 416 aa10.66□□□□□ -0.7
COL8A1-207ENST00000483969 COL2A1P02458 1487 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-207ENST00000483969 HIP1O00291 1037 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 PRKAB2O43741 272 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 CHGBP05060 677 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 APPP05067 770 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 GTF2A2P52657 109 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 TEAD4Q15561 434 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 SDR42E1Q8WUS8 393 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 NACAP1Q9BZK3 213 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 EHD4Q9H223 541 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 SERPINB13Q9UIV8 391 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 SNCAIPQ9Y6H5 919 aa10.65□□□□□ -0.7
COL8A1-207ENST00000483969 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms