RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 CLEC4DQ8WXI8 215 aa30.83■■■□□ 2.53
GTF3C4-202ENST00000483873 SHISA4Q96DD7 197 aa30.83■■■□□ 2.53
GTF3C4-202ENST00000483873 DEFB118Q96PH6 123 aa30.83■■■□□ 2.53
GTF3C4-202ENST00000483873 MAP3K14Q99558 947 aa30.83■■■□□ 2.53
GTF3C4-202ENST00000483873 SLC12A7Q9Y666 1083 aa30.83■■■□□ 2.53
GTF3C4-202ENST00000483873 SEC24BO95487 1268 aa30.82■■■□□ 2.52
GTF3C4-202ENST00000483873 CASTP20810 708 aaKnown RBP30.82■■■□□ 2.52
GTF3C4-202ENST00000483873 CNTN2Q02246 1040 aa30.82■■■□□ 2.52
GTF3C4-202ENST00000483873 NSMFQ6X4W1 530 aa30.82■■■□□ 2.52
GTF3C4-202ENST00000483873 TRPV1Q8NER1 839 aa30.82■■■□□ 2.52
GTF3C4-202ENST00000483873 CTCFLQ8NI51 663 aaPredicted RBP30.82■■■□□ 2.52
GTF3C4-202ENST00000483873 MTMR8Q96EF0 704 aa30.82■■■□□ 2.52
GTF3C4-202ENST00000483873 RIOX1Q9H6W3 641 aa30.82■■■□□ 2.52
GTF3C4-202ENST00000483873 BRPF3Q9ULD4 1205 aa30.82■■■□□ 2.52
GTF3C4-202ENST00000483873 RPS6KB1P23443 525 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 MICU3Q86XE3 530 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 HOMER1Q86YM7 354 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 U2AF1L4Q8WU68 220 aaKnown RBP30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 CYP39A1Q9NYL5 469 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 MKI67P46013 3256 aaKnown RBP30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 PLEKHA8P1O95397 391 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 GJA8P48165 433 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 PRAMEF19Q5SWL8 479 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 APOA5Q6Q788 366 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 Q6ZUG5 572 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 FAM133AQ8N9E0 248 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 PIGSQ96S52 555 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 TINF2Q9BSI4 451 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 PNMA2Q9UL42 364 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 PFASO15067 1338 aa30.81■■■□□ 2.52
GTF3C4-202ENST00000483873 POTEB2H3BUK9 544 aa30.8■■■□□ 2.52
GTF3C4-202ENST00000483873 PPP1R11O60927 126 aaPredicted RBP30.8■■■□□ 2.52
GTF3C4-202ENST00000483873 CYBAP13498 195 aa30.8■■■□□ 2.52
GTF3C4-202ENST00000483873 PSMA5P28066 241 aa30.8■■■□□ 2.52
GTF3C4-202ENST00000483873 KIF5BP33176 963 aa30.8■■■□□ 2.52
GTF3C4-202ENST00000483873 FBXO11Q86XK2 927 aa30.8■■■□□ 2.52
GTF3C4-202ENST00000483873 SGPL1O95470 568 aa30.79■■■□□ 2.52
GTF3C4-202ENST00000483873 CALM1P0DP23 149 aa30.79■■■□□ 2.52
GTF3C4-202ENST00000483873 CALM2P0DP24 149 aa30.79■■■□□ 2.52
GTF3C4-202ENST00000483873 CALM3P0DP25 149 aa30.79■■■□□ 2.52
GTF3C4-202ENST00000483873 CMTR1Q8N1G2 835 aaKnown RBP30.79■■■□□ 2.52
GTF3C4-202ENST00000483873 PURBQ96QR8 312 aaKnown RBP30.79■■■□□ 2.52
GTF3C4-202ENST00000483873 TNRC18O15417 2968 aaPredicted RBP30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 ASTN1O14525 1302 aa30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 KLF18A0A0U1RQI7 1052 aa30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 SOWAHBA6NEL2 793 aa30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 ZBTB5O15062 677 aa30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 FGD1P98174 961 aa30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 BAATQ14032 418 aaPredicted RBP30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 C8orf34Q49A92 452 aa30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 SLC30A10Q6XR72 485 aa30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 PIBF1Q8WXW3 757 aa30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 LRRC37A2A6NM11 1700 aa30.78■■■□□ 2.52
GTF3C4-202ENST00000483873 ABCB11O95342 1321 aa30.77■■■□□ 2.52
GTF3C4-202ENST00000483873 SRBD1Q8N5C6 995 aaKnown RBP30.77■■■□□ 2.52
GTF3C4-202ENST00000483873 FANCBQ8NB91 859 aa30.77■■■□□ 2.52
GTF3C4-202ENST00000483873 ZSWIM6Q9HCJ5 1215 aa30.77■■■□□ 2.52
GTF3C4-202ENST00000483873 PTPDC1A2A3K4 754 aa30.76■■■□□ 2.51
GTF3C4-202ENST00000483873 CNGA1P29973 690 aa30.76■■■□□ 2.51
GTF3C4-202ENST00000483873 APOBRQ0VD83 1088 aa30.76■■■□□ 2.51
GTF3C4-202ENST00000483873 SYNE3Q6ZMZ3 975 aa30.76■■■□□ 2.51
GTF3C4-202ENST00000483873 RUFY3Q7L099 469 aa30.76■■■□□ 2.51
GTF3C4-202ENST00000483873 ZNF467Q7Z7K2 595 aaPredicted RBP30.76■■■□□ 2.51
GTF3C4-202ENST00000483873 BRF1Q92994 677 aa30.76■■■□□ 2.51
GTF3C4-202ENST00000483873 SPZ1Q9BXG8 430 aa30.76■■■□□ 2.51
GTF3C4-202ENST00000483873 ZBTB43O43298 467 aa30.75■■■□□ 2.51
GTF3C4-202ENST00000483873 MAMDC4Q6UXC1 1216 aa30.75■■■□□ 2.51
GTF3C4-202ENST00000483873 AMNQ9BXJ7 453 aa30.75■■■□□ 2.51
GTF3C4-202ENST00000483873 UPF3BQ9BZI7 483 aaKnown RBP30.75■■■□□ 2.51
GTF3C4-202ENST00000483873 CRISPLD2Q9H0B8 497 aa30.75■■■□□ 2.51
GTF3C4-202ENST00000483873 DDX49Q9Y6V7 483 aaKnown RBP30.75■■■□□ 2.51
GTF3C4-202ENST00000483873 SNAI1O95863 264 aaPredicted RBP30.74■■■□□ 2.51
GTF3C4-202ENST00000483873 GNAQP50148 359 aa30.74■■■□□ 2.51
GTF3C4-202ENST00000483873 RNF207Q6ZRF8 634 aa30.74■■■□□ 2.51
GTF3C4-202ENST00000483873 TBC1D5Q92609 795 aa30.74■■■□□ 2.51
GTF3C4-202ENST00000483873 AGXT2Q9BYV1 514 aa30.74■■■□□ 2.51
GTF3C4-202ENST00000483873 TM6SF1Q9BZW5 370 aa30.74■■■□□ 2.51
GTF3C4-202ENST00000483873 NAP1L2Q9ULW6 460 aaPredicted RBP30.74■■■□□ 2.51
GTF3C4-202ENST00000483873 SYNGAP1Q96PV0 1343 aa30.74■■■□□ 2.51
GTF3C4-202ENST00000483873 TFRCP02786 760 aaKnown RBP30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 CALML3P27482 149 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 RPS6P62753 249 aaKnown RBP30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 TMTC3Q6ZXV5 915 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 MSL3Q8N5Y2 521 aaKnown RBP30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 PNMA6FA0A0J9YX94 578 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 LHX8Q68G74 356 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 ARMCX2Q7L311 632 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 FBXL16Q8N461 479 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 CCDC82Q8N4S0 544 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 LZTS2Q9BRK4 669 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 MRPL11Q9Y3B7 192 aaKnown RBP30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 PCDHA1Q9Y5I3 950 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 CYP46A1Q9Y6A2 500 aa30.73■■■□□ 2.51
GTF3C4-202ENST00000483873 GOLGA8AA7E2F4 631 aa30.72■■■□□ 2.51
GTF3C4-202ENST00000483873 GOLGA8BA8MQT2 603 aa30.72■■■□□ 2.51
GTF3C4-202ENST00000483873 RTN1Q16799 776 aa30.72■■■□□ 2.51
GTF3C4-202ENST00000483873 ANO1Q5XXA6 986 aa30.72■■■□□ 2.51
GTF3C4-202ENST00000483873 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.72■■■□□ 2.51
GTF3C4-202ENST00000483873 DDX20Q9UHI6 824 aaKnown RBP30.72■■■□□ 2.51
GTF3C4-202ENST00000483873 OPLAHO14841 1288 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms