RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
SSR1-208ENST00000483409 CTCFLQ8NI51 663 aaPredicted RBP15.59■□□□□ 0.09
SSR1-208ENST00000483409 DIS3Q9Y2L1 958 aaKnown RBP15.59■□□□□ 0.09
SSR1-208ENST00000483409 SLC12A7Q9Y666 1083 aa15.59■□□□□ 0.09
SSR1-208ENST00000483409 PFASO15067 1338 aa15.59■□□□□ 0.09
SSR1-208ENST00000483409 LRRC37A2A6NM11 1700 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 POTEB2H3BUK9 544 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 SGPL1O95470 568 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 CYBAP13498 195 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 CNGA1P29973 690 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 CNTN2Q02246 1040 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 PRAMEF19Q5SWL8 479 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 SGMS1Q86VZ5 419 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 MICU3Q86XE3 530 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 FBXO11Q86XK2 927 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 HOMER1Q86YM7 354 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 CLEC4DQ8WXI8 215 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 FGD4Q96M96 766 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 MAP3K14Q99558 947 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 TINF2Q9BSI4 451 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 CYP39A1Q9NYL5 469 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 PNMA2Q9UL42 364 aa15.58■□□□□ 0.08
SSR1-208ENST00000483409 PTPDC1A2A3K4 754 aa15.57■□□□□ 0.08
SSR1-208ENST00000483409 CYTH3O43739 400 aa15.57■□□□□ 0.08
SSR1-208ENST00000483409 TFRCP02786 760 aaKnown RBP15.57■□□□□ 0.08
SSR1-208ENST00000483409 CASTP20810 708 aaKnown RBP15.57■□□□□ 0.08
SSR1-208ENST00000483409 KIF5BP33176 963 aa15.57■□□□□ 0.08
SSR1-208ENST00000483409 FGD1P98174 961 aa15.57■□□□□ 0.08
SSR1-208ENST00000483409 MLLT1Q03111 559 aaPredicted RBP15.57■□□□□ 0.08
SSR1-208ENST00000483409 FAM133AQ8N9E0 248 aa15.57■□□□□ 0.08
SSR1-208ENST00000483409 PIBF1Q8WXW3 757 aa15.57■□□□□ 0.08
SSR1-208ENST00000483409 PLEKHA8P1O95397 391 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 CALM1P0DP23 149 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 CALM2P0DP24 149 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 CALM3P0DP25 149 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 RPS6KB1P23443 525 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 PSMA5P28066 241 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 BAATQ14032 418 aaPredicted RBP15.56■□□□□ 0.08
SSR1-208ENST00000483409 APOA5Q6Q788 366 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 SLC30A10Q6XR72 485 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 SYNE3Q6ZMZ3 975 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 Q6ZUG5 572 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 ZNF467Q7Z7K2 595 aaPredicted RBP15.56■□□□□ 0.08
SSR1-208ENST00000483409 MTMR8Q96EF0 704 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 PURBQ96QR8 312 aaKnown RBP15.56■□□□□ 0.08
SSR1-208ENST00000483409 PIGSQ96S52 555 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 CRISPLD2Q9H0B8 497 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 RIOX1Q9H6W3 641 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 BRPF3Q9ULD4 1205 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 NAP1L2Q9ULW6 460 aaPredicted RBP15.56■□□□□ 0.08
SSR1-208ENST00000483409 ABCB11O95342 1321 aa15.56■□□□□ 0.08
SSR1-208ENST00000483409 TNRC18O15417 2968 aaPredicted RBP15.55■□□□□ 0.08
SSR1-208ENST00000483409 ASTN1O14525 1302 aa15.55■□□□□ 0.08
SSR1-208ENST00000483409 SYNGAP1Q96PV0 1343 aa15.55■□□□□ 0.08
SSR1-208ENST00000483409 KLF18A0A0U1RQI7 1052 aa15.55■□□□□ 0.08
SSR1-208ENST00000483409 SOWAHBA6NEL2 793 aa15.55■□□□□ 0.08
SSR1-208ENST00000483409 ZBTB5O15062 677 aa15.55■□□□□ 0.08
SSR1-208ENST00000483409 PPP1R11O60927 126 aaPredicted RBP15.55■□□□□ 0.08
SSR1-208ENST00000483409 CALML3P27482 149 aa15.55■□□□□ 0.08
SSR1-208ENST00000483409 ANO1Q5XXA6 986 aa15.55■□□□□ 0.08
SSR1-208ENST00000483409 RNF207Q6ZRF8 634 aa15.55■□□□□ 0.08
SSR1-208ENST00000483409 CMTR1Q8N1G2 835 aaKnown RBP15.55■□□□□ 0.08
SSR1-208ENST00000483409 AMNQ9BXJ7 453 aa15.55■□□□□ 0.08
SSR1-208ENST00000483409 DDX20Q9UHI6 824 aaKnown RBP15.55■□□□□ 0.08
SSR1-208ENST00000483409 DDX49Q9Y6V7 483 aaKnown RBP15.55■□□□□ 0.08
SSR1-208ENST00000483409 ZBTB43O43298 467 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 FARP2O94887 1054 aaPredicted RBP15.54■□□□□ 0.08
SSR1-208ENST00000483409 SEC24BO95487 1268 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 SNAI1O95863 264 aaPredicted RBP15.54■□□□□ 0.08
SSR1-208ENST00000483409 GNAQP50148 359 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 RPS6P62753 249 aaKnown RBP15.54■□□□□ 0.08
SSR1-208ENST00000483409 APOBRQ0VD83 1088 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 LHX8Q68G74 356 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 MAMDC4Q6UXC1 1216 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 ARMCX2Q7L311 632 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 SRBD1Q8N5C6 995 aaKnown RBP15.54■□□□□ 0.08
SSR1-208ENST00000483409 MSL3Q8N5Y2 521 aaKnown RBP15.54■□□□□ 0.08
SSR1-208ENST00000483409 FANCBQ8NB91 859 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 BRF1Q92994 677 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 SPZ1Q9BXG8 430 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.54■□□□□ 0.08
SSR1-208ENST00000483409 ZHX1Q9UKY1 873 aaPredicted RBP15.54■□□□□ 0.08
SSR1-208ENST00000483409 CNPY2Q9Y2B0 182 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 MRPL11Q9Y3B7 192 aaKnown RBP15.54■□□□□ 0.08
SSR1-208ENST00000483409 PDE4DIPQ5VU43 2346 aa15.54■□□□□ 0.08
SSR1-208ENST00000483409 PNMA6FA0A0J9YX94 578 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 GOLGA8AA7E2F4 631 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 GOLGA8BA8MQT2 603 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 SEPT4O43236 478 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 RTN1Q16799 776 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 TMTC3Q6ZXV5 915 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 RUFY3Q7L099 469 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 CCDC82Q8N4S0 544 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 TBC1D5Q92609 795 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 LZTS2Q9BRK4 669 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 UPF3BQ9BZI7 483 aaKnown RBP15.53■□□□□ 0.08
SSR1-208ENST00000483409 ZSWIM6Q9HCJ5 1215 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 NRBP1Q9UHY1 535 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 OGDHLQ9ULD0 1010 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 PCDHA1Q9Y5I3 950 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms