RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 IL17RBQ9NRM6 502 aa16.51■□□□□ 0.23
VARS-226ENST00000483275 ELP1O95163 1332 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 TSPY2A6NKD2 308 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 ARVCFO00192 962 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 SLC3A2P08195 630 aaKnown RBP16.5■□□□□ 0.23
VARS-226ENST00000483275 MX1P20591 662 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 TNFAIP2Q03169 654 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 TMEM240Q5SV17 173 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 MFSD5Q6N075 450 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 TLK2Q86UE8 772 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 PCSK9Q8NBP7 692 aaKnown RBP16.5■□□□□ 0.23
VARS-226ENST00000483275 STAG1Q8WVM7 1258 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 TIFAQ96CG3 184 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 PRDM6Q9NQX0 595 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 PRR12Q9ULL5 1215 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 SCN5AQ14524 2016 aa16.5■□□□□ 0.23
VARS-226ENST00000483275 MROH7Q68CQ1 1323 aa16.49■□□□□ 0.23
VARS-226ENST00000483275 ERC2O15083 957 aa16.49■□□□□ 0.23
VARS-226ENST00000483275 SMPD1P17405 629 aa16.49■□□□□ 0.23
VARS-226ENST00000483275 SLC16A2P36021 539 aa16.49■□□□□ 0.23
VARS-226ENST00000483275 PSMC6P62333 389 aa16.49■□□□□ 0.23
VARS-226ENST00000483275 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
VARS-226ENST00000483275 TTBK2Q6IQ55 1244 aa16.49■□□□□ 0.23
VARS-226ENST00000483275 NSMFQ6X4W1 530 aa16.49■□□□□ 0.23
VARS-226ENST00000483275 FAM160B2Q86V87 743 aa16.49■□□□□ 0.23
VARS-226ENST00000483275 SYNPO2Q9UMS6 1093 aa16.49■□□□□ 0.23
VARS-226ENST00000483275 FRMPD2Q68DX3 1309 aaPredicted RBP16.48■□□□□ 0.23
VARS-226ENST00000483275 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
VARS-226ENST00000483275 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.48■□□□□ 0.23
VARS-226ENST00000483275 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.48■□□□□ 0.23
VARS-226ENST00000483275 RANBP6O60518 1105 aaKnown RBP16.48■□□□□ 0.23
VARS-226ENST00000483275 PPIGQ13427 754 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■■■■□ 23.9
VARS-226ENST00000483275 FSCN1Q16658 493 aaKnown RBP16.48■□□□□ 0.23
VARS-226ENST00000483275 ZNF365Q70YC5 407 aa16.48■□□□□ 0.23
VARS-226ENST00000483275 PPP1R13LQ8WUF5 828 aa16.48■□□□□ 0.23
VARS-226ENST00000483275 CHURC1Q8WUH1 139 aa16.48■□□□□ 0.23
VARS-226ENST00000483275 PPM1EQ8WY54 764 aa16.48■□□□□ 0.23
VARS-226ENST00000483275 PBX4Q9BYU1 374 aa16.48■□□□□ 0.23
VARS-226ENST00000483275 ZNF576Q9H609 170 aa16.48■□□□□ 0.23
VARS-226ENST00000483275 CYP39A1Q9NYL5 469 aa16.48■□□□□ 0.23
VARS-226ENST00000483275 CXXC1Q9P0U4 656 aaPredicted RBP16.48■□□□□ 0.23
VARS-226ENST00000483275 CCPG1Q9ULG6 757 aa16.48■□□□□ 0.23
VARS-226ENST00000483275 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
VARS-226ENST00000483275 GRIN2DO15399 1336 aa16.47■□□□□ 0.23
VARS-226ENST00000483275 MUC3AQ02505 3323 aa16.47■□□□□ 0.23
VARS-226ENST00000483275 DYNC1LI2O43237 492 aaPredicted RBP16.47■□□□□ 0.23
VARS-226ENST00000483275 CCL23P55773 120 aa16.47■□□□□ 0.23
VARS-226ENST00000483275 RRP12Q5JTH9 1297 aaKnown RBP16.47■□□□□ 0.23
VARS-226ENST00000483275 TRPV6Q9H1D0 765 aa16.47■□□□□ 0.23
VARS-226ENST00000483275 PRDM12Q9H4Q4 367 aa16.47■□□□□ 0.23
VARS-226ENST00000483275 TOMM22Q9NS69 142 aa16.47■□□□□ 0.23
VARS-226ENST00000483275 TRANK1O15050 2925 aa16.47■□□□□ 0.23
VARS-226ENST00000483275 TMEM265A0A087WTH1 108 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 A0A0D9SFI3 127 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 TLR3O15455 904 aaKnown RBP16.46■□□□□ 0.23
VARS-226ENST00000483275 CD4P01730 458 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 RCSD1Q6JBY9 416 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 TAPT1Q6NXT6 567 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 TMEM199Q8N511 208 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 FAM227BQ96M60 508 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 AP5M1Q9H0R1 490 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 HIPK3Q9H422 1215 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 GPCPD1Q9NPB8 672 aa16.46■□□□□ 0.23
VARS-226ENST00000483275 LAMA4Q16363 1823 aa16.45■□□□□ 0.22
VARS-226ENST00000483275 ASB14A6NK59 587 aa16.45■□□□□ 0.22
VARS-226ENST00000483275 RBAK-RBAKDNI3L0D1 243 aa16.45■□□□□ 0.22
VARS-226ENST00000483275 NFIBO00712 420 aa16.45■□□□□ 0.22
VARS-226ENST00000483275 B4GALT4O60513 344 aa16.45■□□□□ 0.22
VARS-226ENST00000483275 HAND2P61296 217 aa16.45■□□□□ 0.22
VARS-226ENST00000483275 ITGA7Q13683 1181 aa16.45■□□□□ 0.22
VARS-226ENST00000483275 RASIP1Q5U651 963 aa16.45■□□□□ 0.22
VARS-226ENST00000483275 SLC30A10Q6XR72 485 aa16.45■□□□□ 0.22
VARS-226ENST00000483275 TANC1Q9C0D5 1861 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 BDP1A6H8Y1 2624 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 FDX1P10109 184 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 TKFCQ3LXA3 575 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 PSRC1Q6PGN9 363 aaPredicted RBP16.44■□□□□ 0.22
VARS-226ENST00000483275 OTOP2Q7RTS6 562 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 SLC43A3Q8NBI5 491 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 CRBNQ96SW2 442 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 WNT8AQ9H1J5 351 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 IL23AQ9NPF7 189 aa16.44■□□□□ 0.22
VARS-226ENST00000483275 ICAM1P05362 532 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 RABGGTBP53611 331 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 NKX3-2P78367 333 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 BAATQ14032 418 aaPredicted RBP16.43■□□□□ 0.22
VARS-226ENST00000483275 SYDE2Q5VT97 1194 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 ZNF589Q86UQ0 364 aaPredicted RBP16.43■□□□□ 0.22
VARS-226ENST00000483275 SCLYQ96I15 445 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 NOC4LQ9BVI4 516 aaKnown RBP16.43■□□□□ 0.22
VARS-226ENST00000483275 RANBP17Q9H2T7 1088 aaKnown RBP16.43■□□□□ 0.22
VARS-226ENST00000483275 NKX2-4Q9H2Z4 354 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 ANAPC4Q9UJX5 808 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 YBX2Q9Y2T7 364 aaKnown RBP16.43■□□□□ 0.22
VARS-226ENST00000483275 MYH6P13533 1939 aa16.43■□□□□ 0.22
VARS-226ENST00000483275 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms