RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 ITGA4P13612 1032 aa5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 TMEM62Q0P6H9 643 aa5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 PAK2Q13177 524 aa5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 PPP2R5DQ14738 602 aa5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 CBX2Q14781 532 aaPredicted RBP5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 PLEKHN1Q494U1 663 aaPredicted RBP5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 CNKSR3Q6P9H4 555 aa5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 FAM129CQ86XR2 697 aa5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 JAMLQ86YT9 394 aa5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 ZDHHC15Q96MV8 337 aa5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 HCFC2Q9Y5Z7 792 aa5.42□□□□□ -1.54
LAPTM4A-202ENST00000483117 CBFA2T2O43439 604 aa5.41□□□□□ -1.54
LAPTM4A-202ENST00000483117 BUB1BO60566 1050 aaPredicted RBP5.41□□□□□ -1.54
LAPTM4A-202ENST00000483117 NOP2P46087 812 aaKnown RBP5.41□□□□□ -1.54
LAPTM4A-202ENST00000483117 ZNF200P98182 395 aaPredicted RBP5.41□□□□□ -1.54
LAPTM4A-202ENST00000483117 ADCY4Q8NFM4 1077 aa5.41□□□□□ -1.54
LAPTM4A-202ENST00000483117 RELTQ969Z4 430 aa5.41□□□□□ -1.54
LAPTM4A-202ENST00000483117 PCDHB10Q9UN67 800 aa5.41□□□□□ -1.54
LAPTM4A-202ENST00000483117 EFR3BQ9Y2G0 817 aa5.41□□□□□ -1.54
LAPTM4A-202ENST00000483117 SF3B6Q9Y3B4 125 aaKnown RBP5.41□□□□□ -1.54
LAPTM4A-202ENST00000483117 SCAMP3O14828 347 aaKnown RBP5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 DBHP09172 617 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 TACR1P25103 407 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 MAPKAPK2P49137 400 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 POU4F1Q01851 419 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 ZC3H14Q6PJT7 736 aaKnown RBP5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 CYP2R1Q6VVX0 501 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 METTL16Q86W50 562 aaKnown RBP5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 ZNF654Q8IZM8 581 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 FEZF2Q8TBJ5 459 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 PTCHD1Q96NR3 888 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 CRBNQ96SW2 442 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 XYLT2Q9H1B5 865 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 PLA2G2DQ9UNK4 145 aa5.4□□□□□ -1.54
LAPTM4A-202ENST00000483117 A0A1W2PQJ5 194 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 OTOL1A6NHN0 477 aaPredicted RBP5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 LIMS1P48059 325 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 EIF6P56537 245 aaKnown RBP5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 COL9A2Q14055 689 aaPredicted RBP5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 NR1I3Q14994 352 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 TCEAL1Q15170 157 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 GNPTABQ3T906 1256 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 BICRALQ6AI39 1079 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 FGD4Q96M96 766 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 PWWP2AQ96N64 755 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 HAUS7Q99871 368 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 MCMBPQ9BTE3 642 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 IRS2Q9Y4H2 1338 aa5.39□□□□□ -1.55
LAPTM4A-202ENST00000483117 A0A087WZG4 1122 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 A0A1W2PQH9 124 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 SRGAP3O43295 1099 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 FOXD2O60548 495 aaPredicted RBP5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 VAMP4O75379 141 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 SASH1O94885 1247 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 CYBBP04839 570 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 SOX9P48436 509 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 DPY19L1Q2PZI1 675 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 C9orf131Q5VYM1 1079 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 PAQR3Q6TCH7 311 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 ZDHHC14Q8IZN3 488 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 SYT8Q8NBV8 401 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 KLHL25Q9H0H3 589 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 PDLIM7Q9NR12 457 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 WHRNQ9P202 907 aa5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 DIS3Q9Y2L1 958 aaKnown RBP5.38□□□□□ -1.55
LAPTM4A-202ENST00000483117 ZC3H12DA2A288 527 aaKnown RBP5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 F8W031 263 aaPredicted RBP5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 STXBP3O00186 592 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 TBC1D8O95759 1140 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 EPHX1P07099 455 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 VAMP1P23763 118 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 IGFBP6P24592 240 aaPredicted RBP5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 L1CAMP32004 1257 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 GIPRP48546 466 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 NFIXQ14938 502 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 HEATR6Q6AI08 1181 aaKnown RBP5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 ADAT2Q7Z6V5 191 aaKnown RBP5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 TP53I13Q8NBR0 393 aaPredicted RBP5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 GPRASP2Q96D09 838 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 RXFP1Q9HBX9 757 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 SLC12A7Q9Y666 1083 aa5.37□□□□□ -1.55
LAPTM4A-202ENST00000483117 AURKAO14965 403 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 ATF2P15336 505 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 PFKLP17858 780 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 FBLN1P23142 703 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 CORO7P57737 925 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 PRR5P85299 388 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 SLC7A5Q01650 507 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 PPP2R5EQ16537 467 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 LINC01356Q8N9X3 169 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 RGS22Q8NE09 1264 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 RASGRP4Q8TDF6 673 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 KLHL6Q8WZ60 621 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 PHAXQ9H814 394 aaKnown RBP5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 RTEL1Q9NZ71 1219 aa5.36□□□□□ -1.55
LAPTM4A-202ENST00000483117 FFAR3O14843 346 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 SYN1P17600 705 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 NASPP49321 788 aaPredicted RBP5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 HDLBPQ00341 1268 aaKnown RBP5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 EEF1DP3Q658K8 133 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms