RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 TANGO6Q9C0B7 1094 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 PCDHA4Q9UN74 947 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 FZD1Q9UP38 647 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 SSC5DA1L4H1 1573 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 POLR2AP24928 1970 aaKnown RBP14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 CCDC194A0A1B0GVG4 234 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 SMCO2A6NFE2 343 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 C19orf81C9J6K1 198 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 TRAK2O60296 914 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 ADCY7P51828 1080 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 TPRNQ4KMQ1 711 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 RILPL1Q5EBL4 403 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 ANKRD13AQ8IZ07 590 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 TMEM87AQ8NBN3 555 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 KIFC2Q96AC6 838 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 GLT8D2Q9H1C3 349 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 CEP131Q9UPN4 1083 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 MYH15Q9Y2K3 1946 aa14.28□□□□□ -0.12
TSPAN1-208ENST00000482928 SYNGAP1Q96PV0 1343 aa14.27□□□□□ -0.12
TSPAN1-208ENST00000482928 BACE1P56817 501 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 UBE2HP62256 183 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 NR5A1Q13285 461 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 VGLL4Q14135 290 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 SLC35G1Q2M3R5 365 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 QRICH1Q2TAL8 776 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 BTNL9Q6UXG8 535 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 FBXO11Q86XK2 927 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 ARMC5Q96C12 935 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 LMBRD1Q9NUN5 540 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 PRR12Q9ULL5 1215 aa14.27□□□□□ -0.13
TSPAN1-208ENST00000482928 ELP1O95163 1332 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 ESYT2A0FGR8 921 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 ATP2B1P20020 1258 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 MRPL12P52815 198 aaKnown RBP14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 ANO1Q5XXA6 986 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 KRT25Q7Z3Z0 450 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 DAGLBQ8NCG7 672 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 KCNG4Q8TDN1 519 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 OXER1Q8TDS5 423 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 LEO1Q8WVC0 666 aaPredicted RBP14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 SYMPKQ92797 1274 aaKnown RBP14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 CUL5Q93034 780 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 SYAP1Q96A49 352 aaPredicted RBP14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 COA7Q96BR5 231 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 USP28Q96RU2 1077 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 SLF1Q9BQI6 1058 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 RTEL1Q9NZ71 1219 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 PCDHA1Q9Y5I3 950 aa14.26□□□□□ -0.13
TSPAN1-208ENST00000482928 RPTORQ8N122 1335 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 PLA2G6O60733 806 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 FLOT1O75955 427 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 YEATS4O95619 227 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 ME1P48163 572 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 CCDC174Q6PII3 467 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 DLK2Q6UY11 383 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 PIK3AP1Q6ZUJ8 805 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 OTOP1Q7RTM1 612 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 RASAL3Q86YV0 1011 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 REXO1Q8N1G1 1221 aaKnown RBP14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 MTMR8Q96EF0 704 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 ZMYND12Q9H0C1 365 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 RPAP3Q9H6T3 665 aaPredicted RBP14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 ELP3Q9H9T3 547 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 POLR3EQ9NVU0 708 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 PNMA2Q9UL42 364 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 SNCAIPQ9Y6H5 919 aa14.25□□□□□ -0.13
TSPAN1-208ENST00000482928 BAZ2BQ9UIF8 2168 aaKnown RBP14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 ZBED4O75132 1171 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 BMP15O95972 392 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 VCAM1P19320 739 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 HMGCS2P54868 508 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 SNAP25P60880 206 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 KLHL40Q2TBA0 621 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 USH1GQ495M9 461 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 KIAA1755Q5JYT7 1200 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 ERO1BQ86YB8 467 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 PRPF38AQ8NAV1 312 aaKnown RBP14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 PSTPIP2Q9H939 334 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 CLIC4Q9Y696 253 aa14.24□□□□□ -0.13
TSPAN1-208ENST00000482928 TNFRSF10AO00220 468 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 SPTLC2O15270 562 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 TRAPPC10P48553 1259 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 NASPP49321 788 aaPredicted RBP14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 PPATQ06203 517 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 NONOQ15233 471 aaKnown RBP eCLIP14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 TTC38Q5R3I4 469 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 MCTP2Q6DN12 878 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 TYW1BQ6NUM6 668 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 FTOQ9C0B1 505 aaKnown RBP eCLIP14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 RANBP17Q9H2T7 1088 aaKnown RBP14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 RIC8AQ9NPQ8 531 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 EMILIN3Q9NT22 766 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 RCOR1Q9UKL0 485 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 PCDHA6Q9UN73 950 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 AFG3L2Q9Y4W6 797 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 PCDHA8Q9Y5H6 950 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 MUC3AQ02505 3323 aa14.23□□□□□ -0.13
TSPAN1-208ENST00000482928 TTC28Q96AY4 2481 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms