RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SYF2O95926 243 aaKnown RBP13.84□□□□□ -0.19
CCDC78-213ENST00000482878 SSBP05455 408 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC78-213ENST00000482878 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
CCDC78-213ENST00000482878 TRAPPC10P48553 1259 aa13.84□□□□□ -0.19
CCDC78-213ENST00000482878 TUBB4BP68371 445 aa13.84□□□□□ -0.19
CCDC78-213ENST00000482878 C4orf32Q8N8J7 132 aa13.84□□□□□ -0.19
CCDC78-213ENST00000482878 HDAC6Q9UBN7 1215 aa13.84□□□□□ -0.19
CCDC78-213ENST00000482878 PFKFB3Q16875 520 aaPredicted RBP13.84□□□□□ -0.19
CCDC78-213ENST00000482878 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
CCDC78-213ENST00000482878 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC78-213ENST00000482878 BAZ2BQ9UIF8 2168 aaKnown RBP13.83□□□□□ -0.19
CCDC78-213ENST00000482878 FAM205AQ6ZU69 1335 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 PARP10Q53GL7 1025 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 RASGRP4Q8TDF6 673 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 LOC102724428A0A0B4J2F2 783 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 PP2D1A8MPX8 630 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 ZEB2O60315 1214 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 STAT6P42226 847 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 CLNS1AP54105 237 aaKnown RBP13.83□□□□□ -0.2
CCDC78-213ENST00000482878 SIK1P57059 783 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 MSL3Q8N5Y2 521 aaKnown RBP13.83□□□□□ -0.2
CCDC78-213ENST00000482878 MB21D1Q8N884 522 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 CAGE1Q8TC20 777 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 MIEF2Q96C03 454 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 CAPZA3Q96KX2 299 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 PYM1Q9BRP8 204 aaKnown RBP13.83□□□□□ -0.2
CCDC78-213ENST00000482878 H7C1D1 291 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 PES1O00541 588 aaKnown RBP13.83□□□□□ -0.2
CCDC78-213ENST00000482878 CYP2D6P10635 497 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 WDR59Q6PJI9 974 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 ADSSL1Q8N142 457 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 OR8K1Q8NGG5 319 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 SGSM3Q96HU1 749 aa13.83□□□□□ -0.2
CCDC78-213ENST00000482878 CHUKO15111 745 aa13.82□□□□□ -0.2
CCDC78-213ENST00000482878 TRAPPC11Q7Z392 1133 aa13.82□□□□□ -0.2
CCDC78-213ENST00000482878 RUFY1Q96T51 708 aa13.82□□□□□ -0.2
CCDC78-213ENST00000482878 HPCAL4Q9UM19 191 aa13.82□□□□□ -0.2
CCDC78-213ENST00000482878 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-213ENST00000482878 SRGAP2O75044 1071 aa13.82□□□□□ -0.2
CCDC78-213ENST00000482878 TUBBP07437 444 aa13.82□□□□□ -0.2
CCDC78-213ENST00000482878 PCP11498 1178 aaKnown RBP13.82□□□□□ -0.2
CCDC78-213ENST00000482878 LONP1P36776 959 aaKnown RBP13.82□□□□□ -0.2
CCDC78-213ENST00000482878 HERVK_113P62684 666 aa13.82□□□□□ -0.2
CCDC78-213ENST00000482878 ARL6IP4Q66PJ3 421 aaKnown RBP13.82□□□□□ -0.2
CCDC78-213ENST00000482878 ZNF507Q8TCN5 953 aa13.82□□□□□ -0.2
CCDC78-213ENST00000482878 GPKOWQ92917 476 aaPredicted RBP eCLIP13.82□□□□□ -0.2
CCDC78-213ENST00000482878 FAM84BQ96KN1 310 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-213ENST00000482878 ABCA3Q99758 1704 aa13.82□□□□□ -0.2
CCDC78-213ENST00000482878 GOLGA6BA6NDN3 693 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 NAA25Q14CX7 972 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 KIRREL3Q8IZU9 778 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 EEF2KMTQ96G04 330 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 PLIN2Q99541 437 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 DNAJC7Q99615 494 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 DCP1AQ9NPI6 582 aaPredicted RBP13.81□□□□□ -0.2
CCDC78-213ENST00000482878 DISC1Q9NRI5 854 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
CCDC78-213ENST00000482878 MYH6P13533 1939 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 PSMD14O00487 310 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 ORC4O43929 436 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 ATP1A1P05023 1023 aaKnown RBP13.81□□□□□ -0.2
CCDC78-213ENST00000482878 CEP85LQ5SZL2 805 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 WDR93Q6P2C0 686 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
CCDC78-213ENST00000482878 BLIDQ8IZY5 108 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 CEP120Q8N960 986 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 SCLT1Q96NL6 688 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 SRP68Q9UHB9 627 aaKnown RBP13.81□□□□□ -0.2
CCDC78-213ENST00000482878 GNPATO15228 680 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 PPFIA1Q13136 1202 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 CAVIN4Q5BKX8 364 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 NSUN4Q96CB9 384 aaKnown RBP13.81□□□□□ -0.2
CCDC78-213ENST00000482878 MMS19Q96T76 1030 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
CCDC78-213ENST00000482878 MYH2Q9UKX2 1941 aa13.81□□□□□ -0.2
CCDC78-213ENST00000482878 ZPR1O75312 459 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 KLRK1P26718 216 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 UBE4AQ14139 1066 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 RCSD1Q6JBY9 416 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 TYW1BQ6NUM6 668 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
CCDC78-213ENST00000482878 ZKSCAN4Q969J2 545 aaPredicted RBP13.8□□□□□ -0.2
CCDC78-213ENST00000482878 TMEM60Q9H2L4 133 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 HAUS4Q9H6D7 363 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 POLD4Q9HCU8 107 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 CAPN11Q9UMQ6 739 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 CACNA1SQ13698 1873 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 KLRC4O43908 158 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 PRPF6O94906 941 aaKnown RBP13.8□□□□□ -0.2
CCDC78-213ENST00000482878 MAP2K1Q02750 393 aaPredicted RBP13.8□□□□□ -0.2
CCDC78-213ENST00000482878 MECOMQ03112 1051 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 CCDC122Q5T0U0 273 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 PRPF38AQ8NAV1 312 aaKnown RBP13.8□□□□□ -0.2
CCDC78-213ENST00000482878 LRRC15Q8TF66 581 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms