RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 USH1GQ495M9 461 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 BTNL9Q6UXG8 535 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 SLC30A10Q6XR72 485 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 NOL8Q76FK4 1167 aaKnown RBP12.29□□□□□ -0.44
CPSF4-212ENST00000482251 SKAP1Q86WV1 359 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 TDHQ8IZJ6 230 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 ENAHQ8N8S7 591 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-212ENST00000482251 PNMA1Q8ND90 353 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 ZSCAN10Q96SZ4 725 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-212ENST00000482251 LBHD1Q9BQE6 289 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-212ENST00000482251 UBA5Q9GZZ9 404 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 ABHD16BQ9H3Z7 469 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 KAT14Q9H8E8 782 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 PDLIM7Q9NR12 457 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 CTNNA3Q9UI47 895 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 RAD50Q92878 1312 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 A0A1W2PPC1 479 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 PQBP1O60828 265 aaKnown RBP12.28□□□□□ -0.44
CPSF4-212ENST00000482251 SNHG28P0DPA3 235 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 CHMLP26374 656 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 CALML3P27482 149 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 BMP8BP34820 402 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 PTH1RQ03431 593 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 BAATQ14032 418 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-212ENST00000482251 SNX17Q15036 470 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 SH3RF1Q7Z6J0 888 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 TTC14Q96N46 770 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 UBAC1Q9BSL1 405 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 KATNBL1Q9H079 304 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 ZSWIM5Q9P217 1185 aa12.28□□□□□ -0.44
CPSF4-212ENST00000482251 ASB14A6NK59 587 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.45
CPSF4-212ENST00000482251 DUSP11O75319 330 aaKnown RBP12.27□□□□□ -0.45
CPSF4-212ENST00000482251 ACLYP53396 1101 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 BEX3Q00994 111 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 TLE2Q04725 743 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 KCNA10Q16322 511 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 CDC37Q16543 378 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-212ENST00000482251 CYB5R4Q7L1T6 521 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 DGKHQ86XP1 1220 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 KRT23Q9C075 422 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 STARD7Q9NQZ5 370 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 PDGFCQ9NRA1 345 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 TAF6LQ9Y6J9 622 aa12.27□□□□□ -0.45
CPSF4-212ENST00000482251 TRIM43BA6NCK2 446 aa12.26□□□□□ -0.45
CPSF4-212ENST00000482251 ALDH5A1P51649 535 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-212ENST00000482251 TNFAIP2Q03169 654 aa12.26□□□□□ -0.45
CPSF4-212ENST00000482251 TMEM63BQ5T3F8 832 aa12.26□□□□□ -0.45
CPSF4-212ENST00000482251 GPATCH4Q5T3I0 446 aaKnown RBP12.26□□□□□ -0.45
CPSF4-212ENST00000482251 IFIT1BQ5T764 474 aaKnown RBP12.26□□□□□ -0.45
CPSF4-212ENST00000482251 TLK2Q86UE8 772 aa12.26□□□□□ -0.45
CPSF4-212ENST00000482251 KLHDC9Q8NEP7 349 aa12.26□□□□□ -0.45
CPSF4-212ENST00000482251 RUFY2Q8WXA3 655 aa12.26□□□□□ -0.45
CPSF4-212ENST00000482251 CLEC4DQ8WXI8 215 aa12.26□□□□□ -0.45
CPSF4-212ENST00000482251 BADQ92934 168 aa12.26□□□□□ -0.45
CPSF4-212ENST00000482251 TRIM43Q96BQ3 446 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-212ENST00000482251 CNNM2Q9H8M5 875 aa12.26□□□□□ -0.45
CPSF4-212ENST00000482251 ASGR1P07306 291 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 CYP21A2P08686 494 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 CLTBP09497 229 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 PARP1P09874 1014 aaKnown RBP12.25□□□□□ -0.45
CPSF4-212ENST00000482251 SMPD1P17405 629 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 ITGB8P26012 769 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 CCDC178Q5BJE1 867 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 GNASQ5JWF2 1037 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 CCSAPQ6IQ19 270 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-212ENST00000482251 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 ADGRF4Q8IZF3 695 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 NUP133Q8WUM0 1156 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 VTI1AQ96AJ9 217 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 UPF3AQ9H1J1 476 aaKnown RBP12.25□□□□□ -0.45
CPSF4-212ENST00000482251 SPC25Q9HBM1 224 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 VAT1LQ9HCJ6 419 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 WDR19Q8NEZ3 1342 aa12.25□□□□□ -0.45
CPSF4-212ENST00000482251 MOXD2PA6NHM9 499 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 CTAGE5O15320 804 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 SGSM2O43147 1006 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 MYH6P13533 1939 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 CST5P28325 142 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-212ENST00000482251 GJA9P57773 515 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 RPS6P62753 249 aaKnown RBP12.24□□□□□ -0.45
CPSF4-212ENST00000482251 TRDNQ13061 729 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 ASPRV1Q53RT3 343 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 C1orf53Q5VUE5 145 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 TAPT1Q6NXT6 567 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 KIAA1211Q6ZU35 1233 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 STOX1Q6ZVD7 989 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 Q7L0L9 218 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 CHST3Q7LGC8 479 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 STAG2Q8N3U4 1231 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 GLT1D1Q96MS3 346 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 TSEN34Q9BSV6 310 aaKnown RBP12.24□□□□□ -0.45
CPSF4-212ENST00000482251 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
CPSF4-212ENST00000482251 DYNC1LI2O43237 492 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-212ENST00000482251 SEC23AQ15436 765 aa12.23□□□□□ -0.45
CPSF4-212ENST00000482251 FSCN1Q16658 493 aaKnown RBP12.23□□□□□ -0.45
CPSF4-212ENST00000482251 QRICH1Q2TAL8 776 aa12.23□□□□□ -0.45
CPSF4-212ENST00000482251 C9orf50Q5SZB4 431 aa12.23□□□□□ -0.45
CPSF4-212ENST00000482251 CXCL17Q6UXB2 119 aa12.23□□□□□ -0.45
CPSF4-212ENST00000482251 RALYLQ86SE5 291 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms