RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 A0A1W2PQY0 241 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 MYADML2A6NDP7 307 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 ASB14A6NK59 587 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 KIAA0355O15063 1070 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 SLC4A3P48751 1232 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 IKQ13123 557 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 KCNA10Q16322 511 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 TRIM60Q495X7 471 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 GPATCH4Q5T3I0 446 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 TAPT1Q6NXT6 567 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 CCDC174Q6PII3 467 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 RGS22Q8NE09 1264 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 CHMP4CQ96CF2 233 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 UBE2OQ9C0C9 1292 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 GPCPD1Q9NPB8 672 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 PDLIM7Q9NR12 457 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 CCPG1Q9ULG6 757 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 GNEQ9Y223 722 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 LAMA3Q16787 3333 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 MCM3APO60318 1980 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 TRIM43BA6NCK2 446 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 B4E1Z4 1266 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 KDM4AO75164 1064 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 CHMLP26374 656 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 MDM2Q00987 491 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 BAATQ14032 418 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 IMMTQ16891 758 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 CCDC96Q2M329 555 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 IQSEC1Q6DN90 963 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 SH3RF1Q7Z6J0 888 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 IQCA1Q86XH1 822 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 ENAHQ8N8S7 591 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 TRIM43Q96BQ3 446 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 LRCH3Q96II8 777 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 ZSCAN10Q96SZ4 725 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 LBHD1Q9BQE6 289 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 ZHX1Q9UKY1 873 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 Q9Y3F1 56 aa11.42□□□□□ -0.58
TMEM39A-207ENST00000482162 FRMPD2Q68DX3 1309 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 RAD50Q92878 1312 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 RBM47A0AV96 593 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 NFIBO00712 420 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 EDNRBP24530 442 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 ITGB8P26012 769 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 SEC23AQ15436 765 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 SLC43A3Q8NBI5 491 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 PCSK9Q8NBP7 692 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 ZKSCAN3Q9BRR0 538 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 KRT23Q9C075 422 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 CNNM2Q9H8M5 875 aa11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 ISY1Q9ULR0 285 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-207ENST00000482162 LAMA4Q16363 1823 aa11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 SMPD1P17405 629 aa11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 TNFAIP2Q03169 654 aa11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 FAAP100Q0VG06 881 aa11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 ASPRV1Q53RT3 343 aa11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 VTA1Q9NP79 307 aa11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 PDGFCQ9NRA1 345 aa11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 TBX21Q9UL17 535 aa11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 DDX49Q9Y6V7 483 aaKnown RBP11.4□□□□□ -0.58
TMEM39A-207ENST00000482162 LCTP09848 1927 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 SGSM2O43147 1006 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 ASGR1P07306 291 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 CLTBP09497 229 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 RPS6P62753 249 aaKnown RBP11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 GHRHRQ02643 423 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 PTH1RQ03431 593 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 GNASQ5JWF2 1037 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 TMEM63BQ5T3F8 832 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 FAM109BQ6ICB4 259 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 NSMFQ6X4W1 530 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 RUFY2Q8WXA3 655 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 MAP4K1Q92918 833 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 BADQ92934 168 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 MTMR8Q96EF0 704 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 GLT1D1Q96MS3 346 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 UBA5Q9GZZ9 404 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 SPC25Q9HBM1 224 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 STARD7Q9NQZ5 370 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 PRKAG2Q9UGJ0 569 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 LTBP2Q14767 1821 aa11.39□□□□□ -0.59
TMEM39A-207ENST00000482162 GRIN2DO15399 1336 aa11.38□□□□□ -0.59
TMEM39A-207ENST00000482162 TNKSO95271 1327 aa11.38□□□□□ -0.59
TMEM39A-207ENST00000482162 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-207ENST00000482162 ARVCFO00192 962 aa11.38□□□□□ -0.59
TMEM39A-207ENST00000482162 CD4P01730 458 aa11.38□□□□□ -0.59
TMEM39A-207ENST00000482162 CYP21A2P08686 494 aa11.38□□□□□ -0.59
TMEM39A-207ENST00000482162 GOLGA8HP0CJ92 632 aa11.38□□□□□ -0.59
TMEM39A-207ENST00000482162 ALDH5A1P51649 535 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-207ENST00000482162 IRX6P78412 446 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms