RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TMEM52Q8NDY8 209 aa8.4□□□□□ -1.06
SF3B1-210ENST00000482158 KCTD13Q8WZ19 329 aa8.4□□□□□ -1.06
SF3B1-210ENST00000482158 CARS2Q9HA77 564 aaKnown RBP8.4□□□□□ -1.06
SF3B1-210ENST00000482158 EBF1Q9UH73 591 aa8.4□□□□□ -1.06
SF3B1-210ENST00000482158 TMEFF2Q9UIK5 374 aaPredicted RBP8.4□□□□□ -1.06
SF3B1-210ENST00000482158 SLC5A6Q9Y289 635 aa8.4□□□□□ -1.06
SF3B1-210ENST00000482158 CPP00450 1065 aa8.39□□□□□ -1.07
SF3B1-210ENST00000482158 KCNJ6P48051 423 aa8.39□□□□□ -1.07
SF3B1-210ENST00000482158 SUMO1P63165 101 aaKnown RBP8.39□□□□□ -1.07
SF3B1-210ENST00000482158 G6PC3Q9BUM1 346 aa8.39□□□□□ -1.07
SF3B1-210ENST00000482158 NCOA5Q9HCD5 579 aaKnown RBP8.39□□□□□ -1.07
SF3B1-210ENST00000482158 LMCD1Q9NZU5 365 aa8.39□□□□□ -1.07
SF3B1-210ENST00000482158 CD2APQ9Y5K6 639 aa8.39□□□□□ -1.07
SF3B1-210ENST00000482158 DNAJC25-GNG10A0A024R161 153 aa8.38□□□□□ -1.07
SF3B1-210ENST00000482158 SSU72P8A0A1W2PR75 194 aa8.38□□□□□ -1.07
SF3B1-210ENST00000482158 TCEA2Q15560 299 aa8.38□□□□□ -1.07
SF3B1-210ENST00000482158 TESK1Q15569 626 aa8.38□□□□□ -1.07
SF3B1-210ENST00000482158 CCDC103Q8IW40 242 aa8.38□□□□□ -1.07
SF3B1-210ENST00000482158 CLUHP3Q96NS8 147 aa8.38□□□□□ -1.07
SF3B1-210ENST00000482158 CDADC1Q9BWV3 514 aa8.38□□□□□ -1.07
SF3B1-210ENST00000482158 ERVK13-1Q9NX77 482 aa8.38□□□□□ -1.07
SF3B1-210ENST00000482158 PLS3P13797 630 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 RPL10P27635 214 aaKnown RBP8.37□□□□□ -1.07
SF3B1-210ENST00000482158 C21orf62-AS1Q17RA5 79 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 EEF1DP3Q658K8 133 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 WAPLQ7Z5K2 1190 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 VSIG10LQ86VR7 867 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 SYNPOQ8N3V7 929 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 PTCHD1Q96NR3 888 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 FEZ1Q99689 392 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 PAK6Q9NQU5 681 aaPredicted RBP8.37□□□□□ -1.07
SF3B1-210ENST00000482158 CLEC1BQ9P126 229 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 ASXL2Q76L83 1435 aa8.37□□□□□ -1.07
SF3B1-210ENST00000482158 PLD2O14939 933 aa8.36□□□□□ -1.07
SF3B1-210ENST00000482158 RAPGEF3O95398 923 aa8.36□□□□□ -1.07
SF3B1-210ENST00000482158 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
SF3B1-210ENST00000482158 SEPHS1P49903 392 aa8.36□□□□□ -1.07
SF3B1-210ENST00000482158 ZP2Q05996 745 aa8.36□□□□□ -1.07
SF3B1-210ENST00000482158 DALRD3Q5D0E6 543 aaKnown RBP8.36□□□□□ -1.07
SF3B1-210ENST00000482158 RALGPS1Q5JS13 557 aa8.36□□□□□ -1.07
SF3B1-210ENST00000482158 ACBD5Q5T8D3 534 aaPredicted RBP8.36□□□□□ -1.07
SF3B1-210ENST00000482158 ANGEL2Q5VTE6 544 aaKnown RBP8.36□□□□□ -1.07
SF3B1-210ENST00000482158 MBLAC2Q68D91 279 aa8.36□□□□□ -1.07
SF3B1-210ENST00000482158 IPO9Q96P70 1041 aaKnown RBP8.36□□□□□ -1.07
SF3B1-210ENST00000482158 ADAMTS10Q9H324 1103 aa8.36□□□□□ -1.07
SF3B1-210ENST00000482158 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.36□□□□□ -1.07
SF3B1-210ENST00000482158 NPFFR2Q9Y5X5 522 aa8.36□□□□□ -1.07
SF3B1-210ENST00000482158 GYS2P54840 703 aa8.35□□□□□ -1.07
SF3B1-210ENST00000482158 TRIM61Q5EBN2 209 aa8.35□□□□□ -1.07
SF3B1-210ENST00000482158 PPIL6Q8IXY8 311 aa8.35□□□□□ -1.07
SF3B1-210ENST00000482158 SLC7A14Q8TBB6 771 aa8.35□□□□□ -1.07
SF3B1-210ENST00000482158 LINC01599Q8WXQ3 324 aa8.35□□□□□ -1.07
SF3B1-210ENST00000482158 FCRL2Q96LA5 508 aaPredicted RBP8.35□□□□□ -1.07
SF3B1-210ENST00000482158 MRPL4Q9BYD3 311 aaKnown RBP8.35□□□□□ -1.07
SF3B1-210ENST00000482158 PRDM7Q9NQW5 492 aa8.35□□□□□ -1.07
SF3B1-210ENST00000482158 KCNQ2O43526 872 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 RFPL3O75679 317 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 ZGLP1P0C6A0 271 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 FUT4P22083 530 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 PABPC4Q13310 644 aaKnown RBP eCLIP8.34□□□□□ -1.07
SF3B1-210ENST00000482158 INF2Q27J81 1249 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 FNDC3BQ53EP0 1204 aaKnown RBP8.34□□□□□ -1.07
SF3B1-210ENST00000482158 KCNT2Q6UVM3 1135 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 USP53Q70EK8 1073 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 GSTCDQ8NEC7 633 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 FLCNQ8NFG4 579 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 MMP19Q99542 508 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 SLC52A2Q9HAB3 445 aa8.34□□□□□ -1.07
SF3B1-210ENST00000482158 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.33□□□□□ -1.08
SF3B1-210ENST00000482158 MEFVO15553 781 aaPredicted RBP8.33□□□□□ -1.08
SF3B1-210ENST00000482158 LCP1P13796 627 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 ENDOUP21128 410 aaKnown RBP8.33□□□□□ -1.08
SF3B1-210ENST00000482158 E4F1Q66K89 784 aaPredicted RBP8.33□□□□□ -1.08
SF3B1-210ENST00000482158 STYK1Q6J9G0 422 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 KSR1Q8IVT5 923 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 DCAF4Q8WV16 495 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 PTPRN2Q92932 1015 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 MAP6Q96JE9 813 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 HHIPL1Q96JK4 782 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 ALPK1Q96QP1 1244 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 TRIM39Q9HCM9 518 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 SLAMF8Q9P0V8 285 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 TRAF6Q9Y4K3 522 aa8.33□□□□□ -1.08
SF3B1-210ENST00000482158 FADS2P1A8MWK0 482 aa8.32□□□□□ -1.08
SF3B1-210ENST00000482158 MSCO60682 206 aa8.32□□□□□ -1.08
SF3B1-210ENST00000482158 PAMP19021 973 aa8.32□□□□□ -1.08
SF3B1-210ENST00000482158 GABREP78334 506 aa8.32□□□□□ -1.08
SF3B1-210ENST00000482158 CPNE8Q86YQ8 564 aa8.32□□□□□ -1.08
SF3B1-210ENST00000482158 NINJ1Q92982 152 aa8.32□□□□□ -1.08
SF3B1-210ENST00000482158 C19orf73Q9NVV2 129 aa8.32□□□□□ -1.08
SF3B1-210ENST00000482158 ADAMTS6Q9UKP5 1117 aa8.32□□□□□ -1.08
SF3B1-210ENST00000482158 NPHP3-ACAD11A0A0J9YXS1 232 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 CLSTN1O94985 981 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 SDSP20132 328 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 CYP2R1Q6VVX0 501 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 FGD2Q7Z6J4 655 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 RCBTB1Q8NDN9 531 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 SCLYQ96I15 445 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 SP110Q9HB58 689 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 TNFRSF10DQ9UBN6 386 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms