RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 GRB10Q13322 594 aa17.92■□□□□ 0.46
HDAC6-224ENST00000481929 FAM133AQ8N9E0 248 aa17.92■□□□□ 0.46
HDAC6-224ENST00000481929 PHOSPHO2Q8TCD6 241 aa17.92■□□□□ 0.46
HDAC6-224ENST00000481929 IL1RAPL2Q9NP60 686 aa17.92■□□□□ 0.46
HDAC6-224ENST00000481929 ZNF316A6NFI3 1004 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-224ENST00000481929 CYP2C9P11712 490 aa17.91■□□□□ 0.46
HDAC6-224ENST00000481929 SMPD1P17405 629 aa17.91■□□□□ 0.46
HDAC6-224ENST00000481929 CTR9Q6PD62 1173 aa17.91■□□□□ 0.46
HDAC6-224ENST00000481929 ACAD9Q9H845 621 aa17.91■□□□□ 0.46
HDAC6-224ENST00000481929 CD320Q9NPF0 282 aa17.91■□□□□ 0.46
HDAC6-224ENST00000481929 FEM1BQ9UK73 627 aa17.91■□□□□ 0.46
HDAC6-224ENST00000481929 SLC4A4Q9Y6R1 1079 aa17.91■□□□□ 0.46
HDAC6-224ENST00000481929 ZBED9Q6R2W3 1325 aa17.91■□□□□ 0.46
HDAC6-224ENST00000481929 GREB1LQ9C091 1923 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-224ENST00000481929 ARHGEF15O94989 841 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 PTGS1P23219 599 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 RFC2P35250 354 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 MRE11P49959 708 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 IQSEC1Q6DN90 963 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 HERC6Q8IVU3 1022 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.9■□□□□ 0.462e-8■■■■□ 25.3
HDAC6-224ENST00000481929 TRMT13Q9NUP7 481 aaKnown RBP17.9■□□□□ 0.46
HDAC6-224ENST00000481929 ARPP21Q9UBL0 812 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-224ENST00000481929 COG6Q9Y2V7 657 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 Q9Y3F1 56 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 TNKSO95271 1327 aa17.9■□□□□ 0.46
HDAC6-224ENST00000481929 SOWAHBA6NEL2 793 aa17.89■□□□□ 0.45
HDAC6-224ENST00000481929 HSP90AB4PQ58FF6 505 aa17.89■□□□□ 0.45
HDAC6-224ENST00000481929 CEP85Q6P2H3 762 aa17.89■□□□□ 0.45
HDAC6-224ENST00000481929 ITPRIPQ8IWB1 547 aa17.89■□□□□ 0.45
HDAC6-224ENST00000481929 UIMC1Q96RL1 719 aa17.89■□□□□ 0.45
HDAC6-224ENST00000481929 MKNK2Q9HBH9 465 aa17.89■□□□□ 0.45
HDAC6-224ENST00000481929 A1CFQ9NQ94 594 aaKnown RBP17.89■□□□□ 0.45
HDAC6-224ENST00000481929 PAG1Q9NWQ8 432 aa17.89■□□□□ 0.45
HDAC6-224ENST00000481929 CLIP2Q9UDT6 1046 aa17.89■□□□□ 0.45
HDAC6-224ENST00000481929 SCN5AQ14524 2016 aa17.88■□□□□ 0.45
HDAC6-224ENST00000481929 FDX1P10109 184 aa17.88■□□□□ 0.45
HDAC6-224ENST00000481929 RASA1P20936 1047 aa17.88■□□□□ 0.45
HDAC6-224ENST00000481929 FBXO16Q8IX29 292 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-224ENST00000481929 FTSJ3Q8IY81 847 aaKnown RBP17.88■□□□□ 0.45
HDAC6-224ENST00000481929 CLASRPQ8N2M8 674 aaKnown RBP17.88■□□□□ 0.45
HDAC6-224ENST00000481929 RHPN1Q8TCX5 695 aa17.88■□□□□ 0.45
HDAC6-224ENST00000481929 FTOQ9C0B1 505 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDAC6-224ENST00000481929 PDGFCQ9NRA1 345 aa17.88■□□□□ 0.45
HDAC6-224ENST00000481929 RNF146Q9NTX7 359 aa17.88■□□□□ 0.45
HDAC6-224ENST00000481929 POLR3EQ9NVU0 708 aa17.88■□□□□ 0.45
HDAC6-224ENST00000481929 COL4A4P53420 1690 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-224ENST00000481929 LPXNO60711 386 aa17.87■□□□□ 0.45
HDAC6-224ENST00000481929 IFIT2P09913 472 aaKnown RBP17.87■□□□□ 0.45
HDAC6-224ENST00000481929 TAPT1Q6NXT6 567 aa17.87■□□□□ 0.45
HDAC6-224ENST00000481929 EEPD1Q7L9B9 569 aa17.87■□□□□ 0.45
HDAC6-224ENST00000481929 GJD3Q8N144 294 aa17.87■□□□□ 0.45
HDAC6-224ENST00000481929 LMCD1Q9NZU5 365 aa17.87■□□□□ 0.45
HDAC6-224ENST00000481929 SSTR3P32745 418 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-224ENST00000481929 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
HDAC6-224ENST00000481929 SPRED2Q7Z698 418 aa17.86■□□□□ 0.45
HDAC6-224ENST00000481929 FAM178BQ8IXR5 827 aa17.86■□□□□ 0.45
HDAC6-224ENST00000481929 STK11IPQ8N1F8 1099 aa17.86■□□□□ 0.45
HDAC6-224ENST00000481929 RETREG2Q8NC44 543 aa17.86■□□□□ 0.45
HDAC6-224ENST00000481929 GDPD5Q8WTR4 605 aa17.86■□□□□ 0.45
HDAC6-224ENST00000481929 UBE2ZQ9H832 354 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-224ENST00000481929 VTA1Q9NP79 307 aa17.86■□□□□ 0.45
HDAC6-224ENST00000481929 ISY1Q9ULR0 285 aaKnown RBP17.86■□□□□ 0.45
HDAC6-224ENST00000481929 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
HDAC6-224ENST00000481929 PITPNM1O00562 1244 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 BAIAP3O94812 1187 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 ALADP13716 330 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 KCNJ6P48051 423 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 UBE3CQ15386 1083 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 TKFCQ3LXA3 575 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 FAM47CQ5HY64 1035 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 TMEM63BQ5T3F8 832 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 KIAA1211Q6ZU35 1233 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-224ENST00000481929 BOLA2Q9H3K6 86 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 GPHNQ9NQX3 736 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-224ENST00000481929 SYNPO2Q9UMS6 1093 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 MYH4Q9Y623 1939 aa17.85■□□□□ 0.45
HDAC6-224ENST00000481929 IGKV6D-41A0A0C4DH26 115 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 MYL3P08590 195 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 IQCF3P0C7M6 154 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 BMP3P12645 472 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 PURAQ00577 322 aaKnown RBP17.84■□□□□ 0.45
HDAC6-224ENST00000481929 NHLH1Q02575 133 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 IKQ13123 557 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-224ENST00000481929 DUSP28Q4G0W2 176 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 SBK1Q52WX2 424 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 LRRC47Q8N1G4 583 aaKnown RBP17.84■□□□□ 0.45
HDAC6-224ENST00000481929 GMCL1P1Q8NEA9 526 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 MKL1Q969V6 931 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 KIF1BPQ96EK5 621 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 SNX27Q96L92 541 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 TRERF1Q96PN7 1200 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 BCL11AQ9H165 835 aa17.84■□□□□ 0.45
HDAC6-224ENST00000481929 ZNF536O15090 1300 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 TMEM232C9JQI7 657 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 CHGBP05060 677 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 ALAS1P13196 640 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 CPT1AP50416 773 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms