RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 CNR2P34972 360 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 ERVFRD-1P60508 538 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 APOBRQ0VD83 1088 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 SLC14A2Q15849 920 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 SEZ6Q53EL9 994 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 WAPLQ7Z5K2 1190 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 SPRED1Q7Z699 444 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 USP48Q86UV5 1035 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 SLITRK4Q8IW52 837 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 REXO1Q8N1G1 1221 aaKnown RBP3.7□□□□□ -1.82
USH2A-204ENST00000481786 USHBP1Q8N6Y0 703 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 ZNF526Q8TF50 670 aaPredicted RBP3.7□□□□□ -1.82
USH2A-204ENST00000481786 EAF1Q96JC9 268 aaPredicted RBP3.7□□□□□ -1.82
USH2A-204ENST00000481786 CCDC74BQ96LY2 380 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 C8orf49Q96NF6 230 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 SPON2Q9BUD6 331 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 FOXP3Q9BZS1 431 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 USP40Q9NVE5 1235 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 KIAA1522Q9P206 1035 aaPredicted RBP3.7□□□□□ -1.82
USH2A-204ENST00000481786 CNOT11Q9UKZ1 510 aaKnown RBP3.7□□□□□ -1.82
USH2A-204ENST00000481786 IQSEC2Q5JU85 1478 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 PPRC1Q5VV67 1664 aaKnown RBP3.7□□□□□ -1.82
USH2A-204ENST00000481786 ASXL2Q76L83 1435 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 CCDC88BA6NC98 1476 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 UNCXA6NJT0 531 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 SCAMP3O14828 347 aaKnown RBP3.69□□□□□ -1.82
USH2A-204ENST00000481786 RGS13O14921 159 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 IGFBP6P24592 240 aaPredicted RBP3.69□□□□□ -1.82
USH2A-204ENST00000481786 RACK1P63244 317 aaKnown RBP3.69□□□□□ -1.82
USH2A-204ENST00000481786 CLCQ05315 142 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 ZNF394Q53GI3 561 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 CPZQ66K79 652 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 METTL16Q86W50 562 aaKnown RBP3.69□□□□□ -1.82
USH2A-204ENST00000481786 KIAA0825Q8IV33 1275 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 RNF141Q8WVD5 230 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 NKD1Q969G9 470 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 RNF34Q969K3 372 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 MAP6Q96JE9 813 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 KIF2CQ99661 725 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 SLITRK6Q9H5Y7 841 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 GMIPQ9P107 970 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 DDX41Q9UJV9 622 aaKnown RBP3.69□□□□□ -1.82
USH2A-204ENST00000481786 KCNH3Q9ULD8 1083 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 PCDHGB7Q9Y5F8 929 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 KIAA0586Q9BVV6 1533 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 FHAD1B1AJZ9 1412 aa3.69□□□□□ -1.82
USH2A-204ENST00000481786 C1QTNF3-AMACRE9PGA6 284 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 FKTNO75072 461 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 UBOX5O94941 541 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 TACR2P21452 398 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 TNNI2P48788 182 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 ZNF165P49910 485 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 MLECQ14165 292 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 RAB3GAP1Q15042 981 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 ARSHQ5FYA8 562 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 CDCP2Q5VXM1 449 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 OVOS1Q6IE37 1185 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 LIPIQ6XZB0 460 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 GK5Q6ZS86 529 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 PHACTR4Q8IZ21 702 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 ATG4CQ96DT6 458 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 MRRFQ96E11 262 aaKnown RBP3.68□□□□□ -1.82
USH2A-204ENST00000481786 KREMEN1Q96MU8 473 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 ANTXR1Q9H6X2 564 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 CNNM2Q9H8M5 875 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 SUSD2Q9UGT4 822 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 HCFC2Q9Y5Z7 792 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 ABCC2Q92887 1545 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 ADAMTSL3P82987 1691 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 PBRM1Q86U86 1689 aa3.68□□□□□ -1.82
USH2A-204ENST00000481786 EPRSP07814 1512 aaKnown RBP3.67□□□□□ -1.82
USH2A-204ENST00000481786 ABCA10Q8WWZ4 1543 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 MEIS3P2A8K0S8 358 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 NOBOXO60393 691 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 MPOP05164 745 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 MCM4P33991 863 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 ACVRL1P37023 503 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 KIR2DL1P43626 348 aaPredicted RBP3.67□□□□□ -1.82
USH2A-204ENST00000481786 KIR2DL2P43627 348 aaPredicted RBP3.67□□□□□ -1.82
USH2A-204ENST00000481786 RTP1P59025 263 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 ZNF200P98182 395 aaPredicted RBP3.67□□□□□ -1.82
USH2A-204ENST00000481786 RPTNQ6XPR3 784 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 FNIP1Q8TF40 1166 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 LOXL4Q96JB6 756 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 ASPNQ9BXN1 380 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 YEATS2Q9ULM3 1422 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 ADAMTS12P58397 1594 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 IRS2Q9Y4H2 1338 aa3.67□□□□□ -1.82
USH2A-204ENST00000481786 ABCA5Q8WWZ7 1642 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 MAP3K4Q9Y6R4 1608 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 ABLIM1O14639 778 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 NME1P15531 152 aaKnown RBP3.66□□□□□ -1.82
USH2A-204ENST00000481786 RAG1P15918 1043 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 POLR2BP30876 1174 aaKnown RBP3.66□□□□□ -1.82
USH2A-204ENST00000481786 GBP1P32455 592 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 GDF5P43026 501 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 CEBPAP49715 358 aaPredicted RBP3.66□□□□□ -1.82
USH2A-204ENST00000481786 HDLBPQ00341 1268 aaKnown RBP3.66□□□□□ -1.82
USH2A-204ENST00000481786 DLX2Q07687 328 aaPredicted RBP3.66□□□□□ -1.82
USH2A-204ENST00000481786 CLEC16AQ2KHT3 1053 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms