RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 NUP133Q8WUM0 1156 aa27.6■■■□□ 2.01
TTC3-217ENST00000481605 SPC25Q9HBM1 224 aa27.6■■■□□ 2.01
TTC3-217ENST00000481605 STARD7Q9NQZ5 370 aa27.6■■■□□ 2.01
TTC3-217ENST00000481605 TRIM43BA6NCK2 446 aa27.59■■■□□ 2.01
TTC3-217ENST00000481605 TRIM43Q96BQ3 446 aaPredicted RBP27.59■■■□□ 2.01
TTC3-217ENST00000481605 ASTN1O14525 1302 aa27.59■■■□□ 2.01
TTC3-217ENST00000481605 KDM4AO75164 1064 aa27.58■■■□□ 2.01
TTC3-217ENST00000481605 SNHG28P0DPA3 235 aa27.58■■■□□ 2.01
TTC3-217ENST00000481605 CST5P28325 142 aaPredicted RBP27.58■■■□□ 2.01
TTC3-217ENST00000481605 GPR153Q6NV75 609 aa27.58■■■□□ 2.01
TTC3-217ENST00000481605 BADQ92934 168 aa27.58■■■□□ 2.01
TTC3-217ENST00000481605 LAMA4Q16363 1823 aa27.58■■■□□ 2.01
TTC3-217ENST00000481605 PQBP1O60828 265 aaKnown RBP27.57■■■□□ 2
TTC3-217ENST00000481605 GSPT1P15170 499 aaKnown RBP27.57■■■□□ 2
TTC3-217ENST00000481605 NT5C2P49902 561 aa27.57■■■□□ 2
TTC3-217ENST00000481605 GJA9P57773 515 aa27.57■■■□□ 2
TTC3-217ENST00000481605 IMMTQ16891 758 aaKnown RBP27.57■■■□□ 2
TTC3-217ENST00000481605 IQCA1Q86XH1 822 aa27.57■■■□□ 2
TTC3-217ENST00000481605 DGKHQ86XP1 1220 aa27.57■■■□□ 2
TTC3-217ENST00000481605 UPF3AQ9H1J1 476 aaKnown RBP27.57■■■□□ 2
TTC3-217ENST00000481605 DDX49Q9Y6V7 483 aaKnown RBP27.57■■■□□ 2
TTC3-217ENST00000481605 LAMA2P24043 3122 aaKnown RBP27.57■■■□□ 2
TTC3-217ENST00000481605 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.57■■■□□ 2
TTC3-217ENST00000481605 B4E1Z4 1266 aa27.57■■■□□ 2
TTC3-217ENST00000481605 CLTBP09497 229 aa27.57■■■□□ 2
TTC3-217ENST00000481605 TTC22Q5TAA0 569 aa27.57■■■□□ 2
TTC3-217ENST00000481605 PCSK9Q8NBP7 692 aaKnown RBP27.57■■■□□ 2
TTC3-217ENST00000481605 PURBQ96QR8 312 aaKnown RBP27.57■■■□□ 2
TTC3-217ENST00000481605 CTNNA3Q9UI47 895 aa27.57■■■□□ 2
TTC3-217ENST00000481605 NFIBO00712 420 aa27.56■■■□□ 2
TTC3-217ENST00000481605 ASGR1P07306 291 aa27.56■■■□□ 2
TTC3-217ENST00000481605 TNFAIP2Q03169 654 aa27.56■■■□□ 2
TTC3-217ENST00000481605 GNASQ5JWF2 1037 aa27.56■■■□□ 2
TTC3-217ENST00000481605 NOL8Q76FK4 1167 aaKnown RBP27.56■■■□□ 2
TTC3-217ENST00000481605 GLT1D1Q96MS3 346 aa27.56■■■□□ 2
TTC3-217ENST00000481605 IL25Q9H293 177 aa27.56■■■□□ 2
TTC3-217ENST00000481605 BAATQ14032 418 aaPredicted RBP27.55■■■□□ 2
TTC3-217ENST00000481605 CCDC178Q5BJE1 867 aa27.55■■■□□ 2
TTC3-217ENST00000481605 GOLGA8HP0CJ92 632 aa27.54■■■□□ 2
TTC3-217ENST00000481605 GPATCH4Q5T3I0 446 aaKnown RBP27.54■■■□□ 2
TTC3-217ENST00000481605 EEPD1Q7L9B9 569 aa27.54■■■□□ 2
TTC3-217ENST00000481605 ANKRD33Q7Z3H0 272 aa27.54■■■□□ 2
TTC3-217ENST00000481605 PNMA1Q8ND90 353 aa27.54■■■□□ 2
TTC3-217ENST00000481605 ZSWIM5Q9P217 1185 aa27.54■■■□□ 2
TTC3-217ENST00000481605 PTPDC1A2A3K4 754 aa27.53■■■□□ 2
TTC3-217ENST00000481605 ITGB8P26012 769 aa27.53■■■□□ 2
TTC3-217ENST00000481605 FBXO16Q8IX29 292 aaPredicted RBP27.53■■■□□ 2
TTC3-217ENST00000481605 DEFB123Q8N688 67 aa27.53■■■□□ 2
TTC3-217ENST00000481605 VTI1AQ96AJ9 217 aa27.53■■■□□ 2
TTC3-217ENST00000481605 TOX2Q96NM4 488 aa27.53■■■□□ 2
TTC3-217ENST00000481605 ZSCAN10Q96SZ4 725 aaPredicted RBP27.53■■■□□ 2
TTC3-217ENST00000481605 KAT14Q9H8E8 782 aa27.53■■■□□ 2
TTC3-217ENST00000481605 PNMA2Q9UL42 364 aa27.53■■■□□ 2
TTC3-217ENST00000481605 ELP1O95163 1332 aa27.53■■■□□ 2
TTC3-217ENST00000481605 DCDC2CA8MYV0 355 aa27.52■■■□□ 2
TTC3-217ENST00000481605 CTAGE5O15320 804 aa27.52■■■□□ 2
TTC3-217ENST00000481605 FAAP100Q0VG06 881 aa27.52■■■□□ 2
TTC3-217ENST00000481605 Q7L0L9 218 aa27.52■■■□□ 2
TTC3-217ENST00000481605 CLEC4DQ8WXI8 215 aa27.52■■■□□ 2
TTC3-217ENST00000481605 PDGFCQ9NRA1 345 aa27.52■■■□□ 2
TTC3-217ENST00000481605 TMEM39AQ9NV64 488 aa27.52■■■□□ 2
TTC3-217ENST00000481605 ADD3Q9UEY8 706 aaKnown RBP27.52■■■□□ 2
TTC3-217ENST00000481605 GNEQ9Y223 722 aaKnown RBP27.52■■■□□ 2
TTC3-217ENST00000481605 LCTP09848 1927 aa27.52■■■□□ 2
TTC3-217ENST00000481605 KIAA0355O15063 1070 aa27.51■■■□□ 2
TTC3-217ENST00000481605 NKX3-2P78367 333 aa27.51■■■□□ 2
TTC3-217ENST00000481605 BEX3Q00994 111 aa27.51■■■□□ 2
TTC3-217ENST00000481605 SHHQ15465 462 aa27.51■■■□□ 2
TTC3-217ENST00000481605 TAPT1Q6NXT6 567 aa27.51■■■□□ 2
TTC3-217ENST00000481605 ENAHQ8N8S7 591 aaPredicted RBP27.51■■■□□ 2
TTC3-217ENST00000481605 ANKS1AQ92625 1134 aa27.51■■■□□ 2
TTC3-217ENST00000481605 KRT23Q9C075 422 aa27.51■■■□□ 2
TTC3-217ENST00000481605 UBA5Q9GZZ9 404 aa27.51■■■□□ 2
TTC3-217ENST00000481605 CPVLQ9H3G5 476 aa27.51■■■□□ 2
TTC3-217ENST00000481605 LRRC37A2A6NM11 1700 aa27.51■■□□□ 1.99
TTC3-217ENST00000481605 RAG1P15918 1043 aa27.51■■□□□ 1.99
TTC3-217ENST00000481605 SMPD1P17405 629 aa27.51■■□□□ 1.99
TTC3-217ENST00000481605 ALDH5A1P51649 535 aaPredicted RBP27.51■■□□□ 1.99
TTC3-217ENST00000481605 SLC30A10Q6XR72 485 aa27.51■■□□□ 1.99
TTC3-217ENST00000481605 TLK2Q86UE8 772 aa27.51■■□□□ 1.99
TTC3-217ENST00000481605 MORC4Q8TE76 937 aa27.51■■□□□ 1.99
TTC3-217ENST00000481605 CNNM2Q9H8M5 875 aa27.51■■□□□ 1.99
TTC3-217ENST00000481605 WDR19Q8NEZ3 1342 aa27.51■■□□□ 1.99
TTC3-217ENST00000481605 COL6A3P12111 3177 aa27.5■■□□□ 1.99
TTC3-217ENST00000481605 TNKSO95271 1327 aa27.5■■□□□ 1.99
TTC3-217ENST00000481605 CALML3P27482 149 aa27.5■■□□□ 1.99
TTC3-217ENST00000481605 C9orf50Q5SZB4 431 aa27.5■■□□□ 1.99
TTC3-217ENST00000481605 IQSEC1Q6DN90 963 aa27.5■■□□□ 1.99
TTC3-217ENST00000481605 RNF207Q6ZRF8 634 aa27.5■■□□□ 1.99
TTC3-217ENST00000481605 VTA1Q9NP79 307 aa27.5■■□□□ 1.99
TTC3-217ENST00000481605 MROH7Q68CQ1 1323 aa27.49■■□□□ 1.99
TTC3-217ENST00000481605 RAD50Q92878 1312 aa27.49■■□□□ 1.99
TTC3-217ENST00000481605 PTGS1P23219 599 aa27.49■■□□□ 1.99
TTC3-217ENST00000481605 AP5M1Q9H0R1 490 aa27.49■■□□□ 1.99
TTC3-217ENST00000481605 A0A0U1RQG5 324 aaPredicted RBP27.48■■□□□ 1.99
TTC3-217ENST00000481605 DYNC1LI2O43237 492 aaPredicted RBP27.48■■□□□ 1.99
TTC3-217ENST00000481605 CDK7P50613 346 aa27.48■■□□□ 1.99
TTC3-217ENST00000481605 USH1GQ495M9 461 aa27.48■■□□□ 1.99
TTC3-217ENST00000481605 KIAA1211Q6ZU35 1233 aa27.48■■□□□ 1.99
TTC3-217ENST00000481605 UBAC1Q9BSL1 405 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms