RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 KIF28PB7ZC32 967 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 PIK3CDO00329 1044 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 PDHXO00330 501 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 CNMDO75829 334 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 TM4SF4P48230 202 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 FOSBP53539 338 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 TKFCQ3LXA3 575 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 CCDC174Q6PII3 467 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 FAM43AQ8N2R8 423 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 TEX13BQ9BXU2 312 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 CCPG1Q9ULG6 757 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 RABGAP1Q9Y3P9 1069 aa19.34■□□□□ 0.69
SCAMP3-207ENST00000480219 ADCY7P51828 1080 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 MRPL12P52815 198 aaKnown RBP19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 SREBF2Q12772 1141 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 MKRN3Q13064 507 aaKnown RBP19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 MCTP2Q6DN12 878 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 NOSTRINQ8IVI9 506 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 OXER1Q8TDS5 423 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 CLEC4DQ8WXI8 215 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 TNPO1Q92973 898 aaKnown RBP19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 CUL5Q93034 780 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 AGBL1Q96MI9 1066 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 RAVER2Q9HCJ3 691 aaKnown RBP19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 MAP3K20Q9NYL2 800 aaKnown RBP19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 BTBD7Q9P203 1132 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 ATP6V1DQ9Y5K8 247 aa19.33■□□□□ 0.68
SCAMP3-207ENST00000480219 ADGRA2Q96PE1 1338 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 MEIS2O14770 477 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 ADAMTS3O15072 1205 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 GCLCP48506 637 aaPredicted RBP19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 NOGQ13253 232 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 NR5A1Q13285 461 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 DEFB115Q30KQ5 88 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 USH1GQ495M9 461 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 FERMT3Q86UX7 667 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 RIOX2Q8IUF8 465 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 REM2Q8IYK8 340 aaPredicted RBP19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 PSTPIP2Q9H939 334 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 RBPJLQ9UBG7 517 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 MORF4L1Q9UBU8 362 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 THSD7BQ9C0I4 1608 aa19.32■□□□□ 0.68
SCAMP3-207ENST00000480219 IGF2BP3O00425 579 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 COPB2P35606 906 aa19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 STAT3P40763 770 aa19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 ATL3Q6DD88 541 aa19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 REXO1Q8N1G1 1221 aaKnown RBP19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 PARK7Q99497 189 aaKnown RBP19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 PCDHA6Q9UN73 950 aa19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 PCDHA8Q9Y5H6 950 aa19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 RBBP6Q7Z6E9 1792 aaKnown RBP19.31■□□□□ 0.68
SCAMP3-207ENST00000480219 SMCHD1A6NHR9 2005 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 MYH15Q9Y2K3 1946 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 HSD17B4P51659 736 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 AP3B2Q13367 1082 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 MYSM1Q5VVJ2 828 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 MCTP1Q6DN14 999 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 SNRNP48Q6IEG0 339 aaKnown RBP19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 CYP4F22Q6NT55 531 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 IFNL1Q8IU54 200 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 CHST13Q8NET6 341 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 SPATC1LQ9H0A9 340 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 RIPK3Q9Y572 518 aa19.3■□□□□ 0.68
SCAMP3-207ENST00000480219 CYP2C8P10632 490 aa19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 TAL1P17542 331 aaPredicted RBP19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 TRAPPC10P48553 1259 aa19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 EARS2Q5JPH6 523 aaKnown RBP19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 SAMD1Q6SPF0 538 aaPredicted RBP19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 KRT25Q7Z3Z0 450 aa19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 MCF2L2Q86YR7 1114 aa19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 CPXCR1Q8N123 301 aa19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 SHCBP1Q8NEM2 672 aa19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 CAPNS2Q96L46 248 aa19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 TXNRD2Q9NNW7 524 aa19.29■□□□□ 0.68
SCAMP3-207ENST00000480219 SLC25A27O95847 323 aa19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 FOSP01100 380 aaPredicted RBP19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 ALAS1P13196 640 aa19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 MUM1L1Q5H9M0 696 aa19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 FOXD4L5Q5VV16 416 aaPredicted RBP19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 FOXD4L4Q8WXT5 416 aaPredicted RBP19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 TRERF1Q96PN7 1200 aa19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 RNF146Q9NTX7 359 aa19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 FBXO40Q9UH90 709 aa19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 MORC2Q9Y6X9 1032 aaPredicted RBP19.28■□□□□ 0.68
SCAMP3-207ENST00000480219 NFIBO00712 420 aa19.27■□□□□ 0.68
SCAMP3-207ENST00000480219 ERVK-9P63128 1117 aa19.27■□□□□ 0.68
SCAMP3-207ENST00000480219 ERVK-24P63145 666 aa19.27■□□□□ 0.68
SCAMP3-207ENST00000480219 GNL2Q13823 731 aaKnown RBP19.27■□□□□ 0.68
SCAMP3-207ENST00000480219 RILPL1Q5EBL4 403 aa19.27■□□□□ 0.68
SCAMP3-207ENST00000480219 CRYGNQ8WXF5 182 aa19.27■□□□□ 0.68
SCAMP3-207ENST00000480219 MOV10L1Q9BXT6 1211 aaKnown RBP19.27■□□□□ 0.68
SCAMP3-207ENST00000480219 ACAD9Q9H845 621 aa19.27■□□□□ 0.68
SCAMP3-207ENST00000480219 FRMPD4Q14CM0 1322 aa19.26■□□□□ 0.67
SCAMP3-207ENST00000480219 GCOM1H8Y6P7 765 aaPredicted RBP19.26■□□□□ 0.67
SCAMP3-207ENST00000480219 BAG4O95429 457 aaKnown RBP19.26■□□□□ 0.67
SCAMP3-207ENST00000480219 POLR2MP0CAP2 368 aa19.26■□□□□ 0.67
SCAMP3-207ENST00000480219 TOB1P50616 345 aaPredicted RBP19.26■□□□□ 0.67
SCAMP3-207ENST00000480219 UBE2SQ16763 222 aa19.26■□□□□ 0.67
SCAMP3-207ENST00000480219 FAM110CQ1W6H9 321 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms