RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 JPH2Q9BR39 696 aaPredicted RBP6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 SLC52A2Q9HAB3 445 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 MRPL40Q9NQ50 206 aaKnown RBP6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 DCTN3O75935 186 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 CYP21A2P08686 494 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 RFX1P22670 979 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 TRIM4Q9C037 500 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 ANGPTL2Q9UKU9 493 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 AGTPBP1Q9UPW5 1226 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 MED23Q9ULK4 1368 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 GRID2IPA4D2P6 1211 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 SMIM23A6NLE4 172 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 SLC1A4P43007 532 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 POLA2Q14181 598 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 EXOC3L4Q17RC7 722 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 KRT24Q2M2I5 525 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 KIFC2Q96AC6 838 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 SLITRK6Q9H5Y7 841 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 ADCY9O60503 1353 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 ITGA6P23229 1130 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 TEDDM1Q5T9Z0 273 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 OTUD7BQ6GQQ9 843 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 SPATA5Q8NB90 893 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 ANKRD27Q96NW4 1050 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 FAM129AQ9BZQ8 928 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 MRPL47Q9HD33 250 aaKnown RBP6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 TNKSO95271 1327 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 RASGRF2O14827 1237 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 MFAP3LO75121 409 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 RNF8O76064 485 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 FGAP02671 866 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 CLTAP09496 248 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 RFC4P35249 363 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 IFNL3Q8IZI9 196 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 NLRC4Q9NPP4 1024 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 A0A0D9SFI3 127 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 NDUFA8P51970 172 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 SLC12A2P55011 1212 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 IFT88Q13099 833 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 DPCR1Q3MIW9 517 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 BRDTQ58F21 947 aaPredicted RBP6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 COG1Q8WTW3 980 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 WDR11Q9BZH6 1224 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 RAB20Q9NX57 234 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 PCDHA12Q9UN75 941 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 FAF1Q9UNN5 650 aaPredicted RBP6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 ADD1P35611 737 aaKnown RBP6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 PPARAQ07869 468 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 ANKRD20A4Q4UJ75 823 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 ANKRD20A8PQ5CZ79 823 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 ANKRD20A2Q5SQ80 823 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 ANKRD20A1Q5TYW2 823 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 KRT39Q6A163 491 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 CSRNP1Q96S65 589 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 DESI2Q9BSY9 194 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 VPS37BQ9H9H4 285 aa6.71□□□□□ -1.33
PRPF4B-205ENST00000480058 IGSF1Q8N6C5 1336 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 EIF3DO15371 548 aaKnown RBP eCLIP6.71□□□□□ -1.347e-7■□□□□ 10.5
PRPF4B-205ENST00000480058 ATF2P15336 505 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 PTK2Q05397 1052 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 SLC39A6Q13433 755 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 TRMT44Q8IYL2 757 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 MAGOHBQ96A72 148 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 ZNF277Q9NRM2 450 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 C1orf112Q9NSG2 853 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 FAM187AA6NFU0 413 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 PRPF3O43395 683 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 SLC26A4O43511 780 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 NSFP46459 744 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 ADAM9Q13443 819 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 OTUD6AQ7L8S5 288 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 CHST3Q7LGC8 479 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 TEX2Q8IWB9 1127 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 CCDC117Q8IWD4 279 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 U2AF1L4Q8WU68 220 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 ZNF496Q96IT1 587 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 SERPINI1Q99574 410 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 EPS15L1Q9UBC2 864 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 PFASO15067 1338 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 ZNF532Q9HCE3 1301 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 GOLGA8CPA6NN73 597 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 BACH1O14867 736 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 ADCY8P40145 1251 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 GARSP41250 739 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 PNOCQ13519 176 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 PPP2R5AQ15172 486 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 PALM2Q8IXS6 379 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 GDAP1L1Q96MZ0 367 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 PLEKHF1Q96S99 279 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 ZSCAN10Q96SZ4 725 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 TRIM31Q9BZY9 425 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 CCDC68Q9H2F9 335 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 SMAPO00193 183 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 GPC4O75487 556 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 PTH1RQ03431 593 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 ALX1Q15699 326 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 SRRM1Q8IYB3 904 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 EXOC8Q8IYI6 725 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 PACSIN2Q9UNF0 486 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 DNMT1P26358 1616 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms