RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 PSMA3P25788 255 aa9.78□□□□□ -0.84
TTC3-216ENST00000479930 LMNB2Q03252 620 aa9.78□□□□□ -0.84
TTC3-216ENST00000479930 RWDD4Q6NW29 188 aaKnown RBP9.78□□□□□ -0.84
TTC3-216ENST00000479930 FAM149B1Q96BN6 582 aa9.78□□□□□ -0.84
TTC3-216ENST00000479930 ZMAT2Q96NC0 199 aaKnown RBP9.78□□□□□ -0.84
TTC3-216ENST00000479930 VPS37BQ9H9H4 285 aa9.78□□□□□ -0.84
TTC3-216ENST00000479930 CASS4Q9NQ75 786 aa9.78□□□□□ -0.84
TTC3-216ENST00000479930 DDX56Q9NY93 547 aaKnown RBP9.78□□□□□ -0.84
TTC3-216ENST00000479930 RFX3P48380 749 aa9.78□□□□□ -0.84
TTC3-216ENST00000479930 TAF7Q15545 349 aaPredicted RBP9.78□□□□□ -0.84
TTC3-216ENST00000479930 TEKT1Q969V4 418 aa9.78□□□□□ -0.84
TTC3-216ENST00000479930 MAP3K2Q9Y2U5 619 aa9.78□□□□□ -0.84
TTC3-216ENST00000479930 MYBBP1AQ9BQG0 1328 aaKnown RBP9.77□□□□□ -0.84
TTC3-216ENST00000479930 TMEM191BP0C7N4 346 aa9.77□□□□□ -0.84
TTC3-216ENST00000479930 GRIN1Q05586 938 aa9.77□□□□□ -0.84
TTC3-216ENST00000479930 FBXL5Q9UKA1 691 aa9.77□□□□□ -0.84
TTC3-216ENST00000479930 CECR2Q9BXF3 1484 aa9.77□□□□□ -0.84
TTC3-216ENST00000479930 FLOT1O75955 427 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 CYBBP04839 570 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 IMPDH2P12268 514 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 SPDYE7PQ495Y7 208 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 CCDC62Q6P9F0 684 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 LAYNQ6UX15 382 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 PLEKHM3Q6ZWE6 761 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 CENPTQ96BT3 561 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 TSEN34Q9BSV6 310 aaKnown RBP9.77□□□□□ -0.85
TTC3-216ENST00000479930 TBC1D7Q9P0N9 293 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 DNAJC6O75061 913 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 ZNF568Q3ZCX4 644 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 CCNYQ8ND76 341 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 NSUN7Q8NE18 718 aaKnown RBP9.77□□□□□ -0.85
TTC3-216ENST00000479930 EXOC6Q8TAG9 804 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 LRRIQ4A6NIV6 560 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 IRF1P10914 325 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 ERFEQ4G0M1 354 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 TTC13Q8NBP0 860 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 NFKBIZQ9BYH8 718 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 ALKBH4Q9NXW9 302 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 TRAF3IP3Q9Y228 551 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 PTPRGP23470 1445 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 GARSP41250 739 aaKnown RBP9.77□□□□□ -0.85
TTC3-216ENST00000479930 DHX58Q96C10 678 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 DNAJC1Q96KC8 554 aaKnown RBP9.77□□□□□ -0.85
TTC3-216ENST00000479930 DDX25Q9UHL0 483 aaKnown RBP9.77□□□□□ -0.85
TTC3-216ENST00000479930 SLC27A3Q5K4L6 730 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 TOGARAM2Q6ZUX3 1019 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 BRINP3Q76B58 766 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 CABLES1Q8TDN4 633 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 SCOCQ9UIL1 159 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 CCNT1O60563 726 aaKnown RBP9.77□□□□□ -0.85
TTC3-216ENST00000479930 CAPN1P07384 714 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 CPB1P15086 417 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 VPS41P49754 854 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 VEPH1Q14D04 833 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 DNAJC11Q9NVH1 559 aa9.77□□□□□ -0.85
TTC3-216ENST00000479930 CLRN2A0PK11 232 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 ACTN1P12814 892 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 FLOT2Q14254 428 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 LRRC14BA6NHZ5 514 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 GPC4O75487 556 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 SF3A3Q12874 501 aaKnown RBP eCLIP9.76□□□□□ -0.851e-6■■□□□ 11.9
TTC3-216ENST00000479930 IMPG1Q17R60 797 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 TPH2Q8IWU9 490 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 SMAD5Q99717 465 aaKnown RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 MKNK1Q9BUB5 465 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 PPP1R12CQ9BZL4 782 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 ZW10O43264 779 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 AKAP5P24588 427 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 RASEFQ8IZ41 740 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 JPH2Q9BR39 696 aaPredicted RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 POLR3CQ9BUI4 534 aaPredicted RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 FAM49AQ9H0Q0 323 aaPredicted RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 BTG4Q9NY30 223 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 ABCD1P33897 745 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 MRPS15P82914 257 aaKnown RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 ELOAQ14241 798 aaKnown RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 PKN3Q6P5Z2 889 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 LVRNQ6Q4G3 990 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 KBTBD3Q8NAB2 608 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 LRRC59Q96AG4 307 aaKnown RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 KRT33AO76009 404 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 ALDH18A1P54886 795 aaKnown RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 ESRP1Q6NXG1 681 aaKnown RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 GLYCTKQ8IVS8 523 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 EHBP1Q8NDI1 1231 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 ENTPD7Q9NQZ7 604 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 PEX14O75381 377 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 GCNT3O95395 438 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 PTPN14Q15678 1187 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 MCUR1Q96AQ8 359 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 IFT43Q96FT9 208 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 UTP6Q9NYH9 597 aaKnown RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 ZNF215Q9UL58 517 aaPredicted RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 CTAGE9A4FU28 777 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 ARHGAP42A6NI28 874 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 PSMA7O14818 248 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 PRPF18Q99633 342 aaKnown RBP9.76□□□□□ -0.85
TTC3-216ENST00000479930 RBSNQ9H1K0 784 aa9.76□□□□□ -0.85
TTC3-216ENST00000479930 MAD1L1Q9Y6D9 718 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms