RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 F8W031 263 aaPredicted RBP7.43□□□□□ -1.22
SF3B1-209ENST00000479532 MYO1BO43795 1136 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 LDHCP07864 332 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 VEGFAP15692 232 aaPredicted RBP7.43□□□□□ -1.22
SF3B1-209ENST00000479532 MSX1P28360 303 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 ANP32AP39687 249 aaKnown RBP7.43□□□□□ -1.22
SF3B1-209ENST00000479532 ZAP70P43403 619 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 RBM5P52756 815 aaKnown RBP eCLIP7.43□□□□□ -1.22
SF3B1-209ENST00000479532 PDE1AP54750 535 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 ZSCAN25Q6NSZ9 544 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 PNMA8AQ86V59 439 aaPredicted RBP7.43□□□□□ -1.22
SF3B1-209ENST00000479532 NPAS4Q8IUM7 802 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 CNTROBQ8N137 903 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 ASB16Q96NS5 453 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 HAUS7Q99871 368 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 PHACTR1Q9C0D0 580 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 KCNQ5Q9NR82 932 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 ADARB2Q9NS39 739 aaKnown RBP7.43□□□□□ -1.22
SF3B1-209ENST00000479532 GPRC5DQ9NZD1 345 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 RAI14Q9P0K7 980 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 STAP2Q9UGK3 403 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 TTF2Q9UNY4 1162 aaKnown RBP7.43□□□□□ -1.22
SF3B1-209ENST00000479532 DOCK2Q92608 1830 aa7.43□□□□□ -1.22
SF3B1-209ENST00000479532 COL1A1P02452 1464 aaPredicted RBP7.43□□□□□ -1.22
SF3B1-209ENST00000479532 MYH7P12883 1935 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 RBM47A0AV96 593 aaKnown RBP7.42□□□□□ -1.22
SF3B1-209ENST00000479532 GOLIM4O00461 696 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 IDH1O75874 414 aaKnown RBP7.42□□□□□ -1.22
SF3B1-209ENST00000479532 EPHX2P34913 555 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 PLA2G4AP47712 749 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 EIF1AXP47813 144 aaKnown RBP7.42□□□□□ -1.22
SF3B1-209ENST00000479532 HDLBPQ00341 1268 aaKnown RBP7.42□□□□□ -1.22
SF3B1-209ENST00000479532 DGKZQ13574 1117 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 DLGAP5Q15398 846 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 RTN1Q16799 776 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 KIF4BQ2VIQ3 1234 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 NAA16Q6N069 864 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-209ENST00000479532 FIGNL1Q6PIW4 674 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 USP50Q70EL3 339 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-209ENST00000479532 ZSCAN29Q8IWY8 852 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-209ENST00000479532 TEKT1Q969V4 418 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 MXD3Q9BW11 206 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 MYOZ2Q9NPC6 264 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 NDFIP2Q9NV92 336 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 ECM29Q5VYK3 1845 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 MYH2Q9UKX2 1941 aa7.42□□□□□ -1.22
SF3B1-209ENST00000479532 NDUFB5O43674 189 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 BAG3O95817 575 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 CYP2E1P05181 493 aaPredicted RBP7.41□□□□□ -1.22
SF3B1-209ENST00000479532 ZFYP08048 801 aaPredicted RBP7.41□□□□□ -1.22
SF3B1-209ENST00000479532 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 H2AFB2P0C5Z0 115 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 BRD2P25440 801 aaKnown RBP7.41□□□□□ -1.22
SF3B1-209ENST00000479532 PRDX5P30044 214 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 TXLNAP40222 546 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 CRKP46108 304 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 ZNF280AP59817 542 aaPredicted RBP7.41□□□□□ -1.22
SF3B1-209ENST00000479532 CFAP100Q494V2 611 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 C4orf17Q53FE4 359 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 EAPPQ56P03 285 aaPredicted RBP7.41□□□□□ -1.22
SF3B1-209ENST00000479532 FAM26DQ5JW98 314 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 TSHZ3Q63HK5 1081 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 ALKBH2Q6NS38 261 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 PI16Q6UXB8 463 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 CERS3Q8IU89 383 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 CERS5Q8N5B7 392 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 PI4K2BQ8TCG2 481 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 OTUD7AQ8TE49 926 aaPredicted RBP7.41□□□□□ -1.22
SF3B1-209ENST00000479532 RILPL2Q969X0 211 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 EVI5LQ96CN4 794 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 GMLQ99445 158 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 FSD1Q9BTV5 496 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 MRIQ9BWK5 157 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 TAF1DQ9H5J8 278 aaPredicted RBP7.41□□□□□ -1.22
SF3B1-209ENST00000479532 TMOD2Q9NZR1 351 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 KLK14Q9P0G3 267 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 SALL3Q9BXA9 1300 aa7.41□□□□□ -1.22
SF3B1-209ENST00000479532 HIP1O00291 1037 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 ZBTB39O15060 712 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 CYP7A1P22680 504 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 EPS15P42566 896 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 RGS3P49796 1198 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 MECOMQ03112 1051 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 TBC1D10BQ4KMP7 808 aaPredicted RBP7.4□□□□□ -1.22
SF3B1-209ENST00000479532 SLC9C2Q5TAH2 1124 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 HHIPL2Q6UWX4 724 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 TICAM2Q86XR7 235 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 RGL4Q8IZJ4 473 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 MAGEB6Q8N7X4 407 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 KBTBD3Q8NAB2 608 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 GIPC2Q8TF65 315 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 ZDHHC15Q96MV8 337 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 PIH1D3Q9NQM4 214 aaKnown RBP7.4□□□□□ -1.22
SF3B1-209ENST00000479532 BRPF3Q9ULD4 1205 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 PCDHGC4Q9Y5F7 938 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 MROH7-TTC4A0A0A0MT08 1334 aa7.4□□□□□ -1.22
SF3B1-209ENST00000479532 MYO5AQ9Y4I1 1855 aaKnown RBP7.4□□□□□ -1.23
SF3B1-209ENST00000479532 RFX7Q2KHR2 1363 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 UNCXA6NJT0 531 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 FZD6O60353 706 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms