RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 KSR1Q8IVT5 923 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 LILRA2Q8N149 483 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 MYLIPQ8WY64 445 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 DNAJC7Q99615 494 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 AARSD1Q9BTE6 412 aaKnown RBP8.22□□□□□ -1.09
CCDC58-204ENST00000479414 PFDN2Q9UHV9 154 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 A0A1W2PQ45 241 aaPredicted RBP8.21□□□□□ -1.1
CCDC58-204ENST00000479414 A0A1W2PQY0 241 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 NRDCO43847 1150 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 PAPLNO95428 1278 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 TBC1D8O95759 1140 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 FGFR1P11362 822 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 JUNBP17275 347 aaPredicted RBP8.21□□□□□ -1.1
CCDC58-204ENST00000479414 GRIA2P42262 883 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 GFRA1P56159 465 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 CEP128Q6ZU80 1094 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 JMYQ8N9B5 988 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 NPLOC4Q8TAT6 608 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 MRFAP1L1Q96HT8 127 aa8.21□□□□□ -1.1
CCDC58-204ENST00000479414 CPP00450 1065 aa8.2□□□□□ -1.1
CCDC58-204ENST00000479414 THBDP07204 575 aa8.2□□□□□ -1.1
CCDC58-204ENST00000479414 SNRPB2P08579 225 aaKnown RBP8.2□□□□□ -1.1
CCDC58-204ENST00000479414 RTP1P59025 263 aa8.2□□□□□ -1.1
CCDC58-204ENST00000479414 SNX17Q15036 470 aa8.2□□□□□ -1.1
CCDC58-204ENST00000479414 LONRF2Q1L5Z9 754 aa8.2□□□□□ -1.1
CCDC58-204ENST00000479414 FYB2Q5VWT5 728 aa8.2□□□□□ -1.1
CCDC58-204ENST00000479414 KREMEN2Q8NCW0 462 aa8.2□□□□□ -1.1
CCDC58-204ENST00000479414 KIRREL1Q96J84 757 aa8.2□□□□□ -1.1
CCDC58-204ENST00000479414 TRBV23OR9-2A0A075B6M9 112 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 TRAV20A0A0B4J274 112 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 WTIPA6NIX2 430 aaPredicted RBP8.19□□□□□ -1.1
CCDC58-204ENST00000479414 TRHRP34981 398 aaPredicted RBP8.19□□□□□ -1.1
CCDC58-204ENST00000479414 MAP4K2Q12851 820 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 TESK1Q15569 626 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 SF1Q15637 639 aaKnown RBP8.19□□□□□ -1.1
CCDC58-204ENST00000479414 SLC14A2Q15849 920 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 HSF5Q4G112 596 aaPredicted RBP8.19□□□□□ -1.1
CCDC58-204ENST00000479414 TIGD5Q53EQ6 642 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 ZBTB38Q8NAP3 1195 aaPredicted RBP8.19□□□□□ -1.1
CCDC58-204ENST00000479414 ABHD4Q8TB40 342 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 FRS2Q8WU20 508 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 C1orf159Q96HA4 380 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 JMJD8Q96S16 334 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 C19orf44Q9H6X5 657 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 GPRC5CQ9NQ84 441 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 KDM2BQ8NHM5 1336 aa8.19□□□□□ -1.1
CCDC58-204ENST00000479414 LOC105371045A0A1W2PR82 267 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 DLX3O60479 287 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 PSPNO60542 156 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 PLS3P13797 630 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 PAMP19021 973 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 ECI1P42126 302 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 SLC35F1Q5T1Q4 408 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 ACBD5Q5T8D3 534 aaPredicted RBP8.18□□□□□ -1.1
CCDC58-204ENST00000479414 GALNT18Q6P9A2 607 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 NLRX1Q86UT6 975 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 TMEM145Q8NBT3 493 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 KCTD13Q8WZ19 329 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 OSBP2Q969R2 916 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 SHISA4Q96DD7 197 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 MMP19Q99542 508 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 IER2Q9BTL4 223 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 CLEC1BQ9P126 229 aa8.18□□□□□ -1.1
CCDC58-204ENST00000479414 NPHP3-ACAD11A0A0J9YXS1 232 aa8.17□□□□□ -1.1
CCDC58-204ENST00000479414 EFEMP2O95967 443 aa8.17□□□□□ -1.1
CCDC58-204ENST00000479414 FAM153BP0C7A2 387 aa8.17□□□□□ -1.1
CCDC58-204ENST00000479414 PABPC1P11940 636 aaKnown RBP8.17□□□□□ -1.1
CCDC58-204ENST00000479414 TAL1P17542 331 aaPredicted RBP8.17□□□□□ -1.1
CCDC58-204ENST00000479414 KCNJ6P48051 423 aa8.17□□□□□ -1.1
CCDC58-204ENST00000479414 E4F1Q66K89 784 aaPredicted RBP8.17□□□□□ -1.1
CCDC58-204ENST00000479414 ZSWIM9Q86XI8 627 aa8.17□□□□□ -1.1
CCDC58-204ENST00000479414 LILRB2Q8N423 598 aa8.17□□□□□ -1.1
CCDC58-204ENST00000479414 ASIC4Q96FT7 647 aa8.17□□□□□ -1.1
CCDC58-204ENST00000479414 ACSL6Q9UKU0 697 aa8.17□□□□□ -1.1
CCDC58-204ENST00000479414 TAF6LQ9Y6J9 622 aa8.17□□□□□ -1.1
CCDC58-204ENST00000479414 PRODHO43272 600 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 L1CAMP32004 1257 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 RBM10P98175 930 aaKnown RBP8.16□□□□□ -1.1
CCDC58-204ENST00000479414 ZC3H12BQ5HYM0 836 aaKnown RBP8.16□□□□□ -1.1
CCDC58-204ENST00000479414 YOD1Q5VVQ6 348 aaPredicted RBP8.16□□□□□ -1.1
CCDC58-204ENST00000479414 IQCEQ6IPM2 695 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 GIMAP6Q6P9H5 292 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 NSMFQ6X4W1 530 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 JAMLQ86YT9 394 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 NLGN2Q8NFZ4 835 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 THAP3Q8WTV1 239 aaPredicted RBP8.16□□□□□ -1.1
CCDC58-204ENST00000479414 PLCD4Q9BRC7 762 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 RNF32Q9H0A6 362 aa8.16□□□□□ -1.1
CCDC58-204ENST00000479414 CWC22Q9HCG8 908 aaKnown RBP8.16□□□□□ -1.1
CCDC58-204ENST00000479414 GLI1P08151 1106 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 CORO7P57737 925 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 KCNAB2Q13303 367 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 LAPTM5Q13571 262 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 KCNMB1Q16558 191 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 PRSS53Q2L4Q9 553 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 C2orf27AQ580R0 203 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 TMEM67Q5HYA8 995 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 MCTP1Q6DN14 999 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 CPNE8Q86YQ8 564 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms